RNA id: CI01000189_02686987_02689446.mRNA



Basic Information


Item Value
RNA id CI01000189_02686987_02689446.mRNA
length 1684
RNA type mRNA
GC content 0.40
exon number 4
gene id CI01000189_02686987_02689446
representative True

Chromosome Information


Item Value
chromosome id CI01000189
NCBI id null
chromosome length 4726117
location 2686041 ~ 2689635 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


AAAGTTCATTAGTTATGTATCTGAGCATGTCTGAAGCCTCTGTAATTCTTCCTGCATCACTTCCTTTTATCTCCACAATTGAGATAAATCACCAAGCACTGCTTTCAGGTTAAGACATGTTAATCTGGGAAATAACACATCTCAAGGTGTGGGATGAACAAATGAATGGAGAAGAAAAGGAAAACGAGAATGGCTATAATTAAATCAGAGATGCACTTGGAAATTACCATATCCATCATTATCTTCATAGATACATATTCCAGCTGCGGTTTGCATAAATCTAATATCCGTATCAAACCCATCGAGAGTACCGTCATCTTAACATACGTAATTCTCATGGGAACATCAGTGCCTCTGGCGCCTGGGTCTCGGTGTGACCCGGAAACTGAGGCAGCTTTGCTAAGGGTTAATGAGCCTGGCATGTGCCAACAGATCAAACGCAAGAATGCCATGAACAAAATTGTAGCTGGTTACTTATCCAAGCCTGTTCATGCTCAAGTAAAAAACAAAAAGATACATGCCAGCACACAATGCGTGTTGGCAGTTCTACATGTGCATGCTAGCGAAACGTGTACCTTTTTCCCCTGGAGGTACTCCTTGTGCTCCTCTCGGAAGTGCTTGGTCCCATATGCCACCTGCTCAAAGGGGGTGGAGGTGTGCATCAGGCCTTCGTACCGCTTAATTCGGCTTGTGTTTGAAAATGGAAGGAAACTGTGGCAAAAAACACATAAGAATTAAAATACTTAATAAGCTGATATACTTTGAATATTATTTGATCAAAATACATTAAAAACAGTAAAATTGTGAACTACAATGCAAGTCTTCTATTGTAATTGATTTAAAAATGTAATTTATTCCTGTGATGGCAAAGCTGAATTTTTTAGCATCATTACTTAGTCTTCAGTTTTACATGATCCTGCAGAAATCATTATTTTGCTGATTTTGGTACTTTTGATCAATTTATTGTGTCCTTGTTGAATGAAAGCATTCATTTATTTAAAAATATTAAAAAAAATAAAATAAAAAAAAATCGCGCTGACCCCAAACTTTTGACTGGTAATGTATATGAATAGGAACATATTTTTCAACAACGGCTTGTTGTATTAGACTTATGTATGGAAAAGAGCATAACCTCAGTGTCGGCCCCATTACTGGCCTCTGGTCTTGGCTAACGCGACTGCTAAGAGCTAACGCTCTGCTATTTTCACAGCACATGTTACTTATATATCATCACATTGCCTCATTCCTCCCTCGCAGGCACTTTACTTTCTAGTCCAGATCATTTCCAAACCCAAATCGCTTCTTAATCGTTGTGATGTCTTGTGGTTGTTTCTGCACATGCTGCGTGTTTGCTGGGCACACGTTCAGTGCAAATAGCAGTTACTTAGGAAAAATGCCAGATGTTAATTACAGCGAGGTTGATTTTGTAAATTGTACCCAAGACACTTTGCCTGGAGGAAGATTTATCCAGTGCGGTACAAGAGGTGTCTGCGCGAGGCTGGATAAACGTCCGCTGGGCATTGGCTTGGCTTGTCACAAAACAAACAAACAACCAACAACCTTGGCACTTTCTGTGAACACAATCTGCAAAGAAAGGTTTTTTATTCCCGATGCTTGGTGTGTTCGTTCCCTTTTATGATGATGAAACCTGAAGTGCAGGTGAAGCCCTGTCCTCTTTAATAAA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU435608 lncRNA downstream 34742 2650977 ~ 2651299 (-) True G381047
TU435596 lncRNA downstream 73166 2612628 ~ 2612875 (-) True G381035
TU435594 lncRNA downstream 80839 2604912 ~ 2605202 (-) True G381033
TU435425 lncRNA downstream 491527 2194257 ~ 2194514 (-) True G380882
TU435405 lncRNA downstream 533956 2149956 ~ 2152085 (-) True G380863
TU435770 lncRNA upstream 26661 2716296 ~ 2716501 (-) True G381184
TU435771 lncRNA upstream 27725 2717360 ~ 2717845 (-) True G381185
TU435788 lncRNA upstream 47049 2736684 ~ 2736957 (-) True G381202
TU435802 lncRNA upstream 63558 2753193 ~ 2753477 (-) True G381216
TU435830 lncRNA upstream 96153 2785788 ~ 2786225 (-) True G381239
CI01000189_02663877_02665709.mRNA mRNA downstream 20251 2663089 ~ 2665790 (-) True CI01000189_02663877_02665709
CI01000189_02469062_02471153.mRNA mRNA downstream 214888 2468614 ~ 2471153 (-) True CI01000189_02469062_02471153
CI01000189_02450025_02461432.mRNA mRNA downstream 224542 2449828 ~ 2461499 (-) True CI01000189_02450025_02461432
CI01000189_02404459_02433659.mRNA mRNA downstream 252382 2404459 ~ 2433659 (-) True CI01000189_02404459_02433659
CI01000189_02383475_02386489.mRNA mRNA downstream 298918 2382566 ~ 2387123 (-) True CI01000189_02383475_02386489
CI01000189_02823407_02846026.mRNA mRNA upstream 133772 2823407 ~ 2846026 (-) True CI01000189_02823407_02846026
CI01000189_02924018_02946613.mRNA mRNA upstream 233666 2923301 ~ 2946613 (-) True CI01000189_02924018_02946613
CI01000189_02961166_02963382.mRNA mRNA upstream 270935 2960570 ~ 2963382 (-) False CI01000189_02961166_02963382
CI01000189_02986636_02986941.mRNA mRNA upstream 296913 2986548 ~ 2986941 (-) True CI01000189_02986636_02986941
CI01000189_03097932_03102218.mRNA mRNA upstream 408047 3097682 ~ 3102815 (-) True CI01000189_03097932_03102218
TU434639 other downstream 1787601 894220 ~ 898440 (-) True G380177
TU434342 other downstream 1920664 753257 ~ 764109 (-) True G379912
TU435899 other upstream 269473 2959108 ~ 2961667 (-) True G381299
TU435927 other upstream 309238 2998873 ~ 3006444 (-) True G381317
TU436781 other upstream 1140992 3830627 ~ 3832613 (-) True G382060
TU436773 other upstream 1195927 3885562 ~ 3892909 (-) True G382052
TU436879 other upstream 1455955 4145590 ~ 4146084 (-) True G382153

Expression Profile