RNA id: TU435425



Basic Information


Item Value
RNA id TU435425
length 258
lncRNA type intronic
GC content 0.55
exon number 1
gene id G380882
representative True

Chromosome Information


Item Value
chromosome id CI01000189
NCBI id null
chromosome length 4726117
location 2194257 ~ 2194514 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


CGGGGTCAGCGCATGCTGAGGCGCACAGTGCGCAGAAGTCGCCAACTTTCTGCAGAGTCAGTAGCTACAGACCTCCAAACTTCGTGTGGCCTTCAGATTAGCTCAAGAACAGTGCGTAGAGAGCTTCATGGAATGGGTTTCCATGGCCGAGCAGCTGCATCCAAGCCTTACATCACCAAGTGCAATGCAAAGCGTCGGATGCAGTGGTGTAAAGCACACCGCCACTGGACTCTAGAGCAGTGGAGACGTGTTCTCTGG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU435405 lncRNA downstream 42172 2149956 ~ 2152085 (-) True G380863
TU435336 lncRNA downstream 85970 2107024 ~ 2108287 (-) True G380803
TU435334 lncRNA downstream 86053 2107024 ~ 2108204 (-) False G380803
TU435073 lncRNA downstream 384028 1809958 ~ 1810229 (-) True G380572
TU435034 lncRNA downstream 451440 1736196 ~ 1742817 (-) True G380535
TU435594 lncRNA upstream 410398 2604912 ~ 2605202 (-) True G381033
TU435596 lncRNA upstream 418114 2612628 ~ 2612875 (-) True G381035
TU435608 lncRNA upstream 456463 2650977 ~ 2651299 (-) True G381047
TU435770 lncRNA upstream 521782 2716296 ~ 2716501 (-) True G381184
TU435771 lncRNA upstream 522846 2717360 ~ 2717845 (-) True G381185
CI01000189_02112135_02130703.mRNA mRNA downstream 62982 2111138 ~ 2131275 (-) True CI01000189_02112135_02130703
CI01000189_02097314_02102754.mRNA mRNA downstream 91392 2096812 ~ 2102865 (-) True CI01000189_02097314_02102754
CI01000189_02080315_02089268.mRNA mRNA downstream 104989 2079637 ~ 2089268 (-) True CI01000189_02080315_02089268
CI01000189_02066231_02077990.mRNA mRNA downstream 116244 2066028 ~ 2078013 (-) True CI01000189_02066231_02077990
CI01000189_02055740_02060849.mRNA mRNA downstream 133408 2055740 ~ 2060849 (-) True CI01000189_02055740_02060849
CI01000189_02383475_02386489.mRNA mRNA upstream 188052 2382566 ~ 2387123 (-) True CI01000189_02383475_02386489
CI01000189_02404459_02433659.mRNA mRNA upstream 209945 2404459 ~ 2433659 (-) True CI01000189_02404459_02433659
CI01000189_02450025_02461432.mRNA mRNA upstream 255314 2449828 ~ 2461499 (-) True CI01000189_02450025_02461432
CI01000189_02469062_02471153.mRNA mRNA upstream 274100 2468614 ~ 2471153 (-) True CI01000189_02469062_02471153
CI01000189_02663877_02665709.mRNA mRNA upstream 468575 2663089 ~ 2665790 (-) True CI01000189_02663877_02665709
TU434639 other downstream 1295817 894220 ~ 898440 (-) True G380177
TU434342 other downstream 1428880 753257 ~ 764109 (-) True G379912
TU435899 other upstream 764594 2959108 ~ 2961667 (-) True G381299
TU435927 other upstream 804359 2998873 ~ 3006444 (-) True G381317
TU436781 other upstream 1636113 3830627 ~ 3832613 (-) True G382060
TU436773 other upstream 1691048 3885562 ~ 3892909 (-) True G382052
TU436879 other upstream 1951076 4145590 ~ 4146084 (-) True G382153

Expression Profile