RNA id: TU435596


Basic Information

Item Value
RNA id TU435596
length 248
lncRNA type inter_gene
GC content 0.36
exon number 1
gene id G381035
representative True

Chromosome Information

Item Value
chromosome id CI01000189
NCBI id null
chromosome length 4726117
location 2612628 ~ 2612875 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

TAAGCGTGAGTCTCAGGTTTCTATGGGAACCGGAGCTTCTAACAGCAGCTGCAGTGATGCAATGACTTTATCAATCAGTGATTGGCTCTTTTACTTAGAAGGAGGAACATATTCCGCCATATTGCACATTGCAGTTTCTTCCATTCATAACTAATAGGAGTGAACCATCTTTCTATATCTATAGTCTTTGTTAATAGTTAATTAAGGACAATTAGTCAACTAAACATTCAGGCAAACCATATATAAAT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU435594 lncRNA downstream 7426 2604912 ~ 2605202 (-) True G381033
TU435425 lncRNA downstream 418114 2194257 ~ 2194514 (-) True G380882
TU435405 lncRNA downstream 460543 2149956 ~ 2152085 (-) True G380863
TU435336 lncRNA downstream 504341 2107024 ~ 2108287 (-) True G380803
TU435334 lncRNA downstream 504424 2107024 ~ 2108204 (-) False G380803
TU435608 lncRNA upstream 38102 2650977 ~ 2651299 (-) True G381047
TU435770 lncRNA upstream 103421 2716296 ~ 2716501 (-) True G381184
TU435771 lncRNA upstream 104485 2717360 ~ 2717845 (-) True G381185
TU435788 lncRNA upstream 123809 2736684 ~ 2736957 (-) True G381202
TU435802 lncRNA upstream 140318 2753193 ~ 2753477 (-) True G381216
CI01000189_02469062_02471153.mRNA mRNA downstream 141475 2468614 ~ 2471153 (-) True CI01000189_02469062_02471153
CI01000189_02450025_02461432.mRNA mRNA downstream 151129 2449828 ~ 2461499 (-) True CI01000189_02450025_02461432
CI01000189_02404459_02433659.mRNA mRNA downstream 178969 2404459 ~ 2433659 (-) True CI01000189_02404459_02433659
CI01000189_02383475_02386489.mRNA mRNA downstream 225505 2382566 ~ 2387123 (-) True CI01000189_02383475_02386489
CI01000189_02167284_02313164.mRNA mRNA downstream 299464 2167284 ~ 2313164 (-) True CI01000189_02167284_02313164
CI01000189_02663877_02665709.mRNA mRNA upstream 50214 2663089 ~ 2665790 (-) True CI01000189_02663877_02665709
CI01000189_02686987_02689446.mRNA mRNA upstream 73166 2686041 ~ 2689635 (-) True CI01000189_02686987_02689446
CI01000189_02823407_02846026.mRNA mRNA upstream 210532 2823407 ~ 2846026 (-) True CI01000189_02823407_02846026
CI01000189_02924018_02946613.mRNA mRNA upstream 310426 2923301 ~ 2946613 (-) True CI01000189_02924018_02946613
CI01000189_02961166_02963382.mRNA mRNA upstream 347695 2960570 ~ 2963382 (-) False CI01000189_02961166_02963382
TU434639 other downstream 1714188 894220 ~ 898440 (-) True G380177
TU434342 other downstream 1847251 753257 ~ 764109 (-) True G379912
TU435899 other upstream 346233 2959108 ~ 2961667 (-) True G381299
TU435927 other upstream 385998 2998873 ~ 3006444 (-) True G381317
TU436781 other upstream 1217752 3830627 ~ 3832613 (-) True G382060
TU436773 other upstream 1272687 3885562 ~ 3892909 (-) True G382052
TU436879 other upstream 1532715 4145590 ~ 4146084 (-) True G382153

Expression Profile