RNA id: TU435802


Basic Information

Item Value
RNA id TU435802
length 285
lncRNA type inter_gene
GC content 0.30
exon number 1
gene id G381216
representative True

Chromosome Information

Item Value
chromosome id CI01000189
NCBI id null
chromosome length 4726117
location 2753193 ~ 2753477 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

GCAAACTATACAGGGAACCCTCTCATTTGGTACACTACAATATTAGAGGTTACAATTAACAACAGAGGTATTATATTCAGCTGCTGTTTATTTTCAGATATAATAATTACACTCAAATAAAAACTGAAATGTATAAAACTTAGTATCACATAAGGTAGTTTTCATAAGCACTTGTTGTCTTCATGGCAAATTTGCACAAACATATAATTAACAGTAAATAAGCTCCTCTCTAGTGTTTTTTATATATAGATAGCTAAGGAACTGTGAACATTGGAAAACATTCCT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU435788 lncRNA downstream 16236 2736684 ~ 2736957 (-) True G381202
TU435771 lncRNA downstream 35348 2717360 ~ 2717845 (-) True G381185
TU435770 lncRNA downstream 36692 2716296 ~ 2716501 (-) True G381184
TU435608 lncRNA downstream 101894 2650977 ~ 2651299 (-) True G381047
TU435596 lncRNA downstream 140318 2612628 ~ 2612875 (-) True G381035
TU435830 lncRNA upstream 32311 2785788 ~ 2786225 (-) True G381239
TU435834 lncRNA upstream 34403 2787880 ~ 2788744 (-) True G381243
TU435837 lncRNA upstream 39555 2793032 ~ 2794349 (-) True G381245
TU435812 lncRNA upstream 50530 2804007 ~ 2820766 (-) True G381223
TU435845 lncRNA upstream 68192 2821669 ~ 2821958 (-) True G381253
CI01000189_02686987_02689446.mRNA mRNA downstream 63558 2686041 ~ 2689635 (-) True CI01000189_02686987_02689446
CI01000189_02663877_02665709.mRNA mRNA downstream 87403 2663089 ~ 2665790 (-) True CI01000189_02663877_02665709
CI01000189_02469062_02471153.mRNA mRNA downstream 282040 2468614 ~ 2471153 (-) True CI01000189_02469062_02471153
CI01000189_02450025_02461432.mRNA mRNA downstream 291694 2449828 ~ 2461499 (-) True CI01000189_02450025_02461432
CI01000189_02404459_02433659.mRNA mRNA downstream 319534 2404459 ~ 2433659 (-) True CI01000189_02404459_02433659
CI01000189_02823407_02846026.mRNA mRNA upstream 69930 2823407 ~ 2846026 (-) True CI01000189_02823407_02846026
CI01000189_02924018_02946613.mRNA mRNA upstream 169824 2923301 ~ 2946613 (-) True CI01000189_02924018_02946613
CI01000189_02961166_02963382.mRNA mRNA upstream 207093 2960570 ~ 2963382 (-) False CI01000189_02961166_02963382
CI01000189_02986636_02986941.mRNA mRNA upstream 233071 2986548 ~ 2986941 (-) True CI01000189_02986636_02986941
CI01000189_03097932_03102218.mRNA mRNA upstream 344205 3097682 ~ 3102815 (-) True CI01000189_03097932_03102218
TU434639 other downstream 1854753 894220 ~ 898440 (-) True G380177
TU434342 other downstream 1987816 753257 ~ 764109 (-) True G379912
TU435899 other upstream 205631 2959108 ~ 2961667 (-) True G381299
TU435927 other upstream 245396 2998873 ~ 3006444 (-) True G381317
TU436781 other upstream 1077150 3830627 ~ 3832613 (-) True G382060
TU436773 other upstream 1132085 3885562 ~ 3892909 (-) True G382052
TU436879 other upstream 1392113 4145590 ~ 4146084 (-) True G382153

Expression Profile