RNA id: TU436610



Basic Information


Item Value
RNA id TU436610
length 235
lncRNA type inter_gene
GC content 0.36
exon number 1
gene id G381914
representative True

Chromosome Information


Item Value
chromosome id CI01000189
NCBI id null
chromosome length 4726117
location 3241281 ~ 3241515 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


CATTCCTGACGGTTCTCATTAGCCTAAATGTTTTAAGGTTTAGTTCACTTTCAAATGAAAATTTTCCCAAACTTTACTCACCCTCAAGCCATCCTATAGGTGTATATGACTTTCTTCTTTCTGATAAACACAATCGGAGAAATATTAATAAATATCGTGACGCATCTGAGATTTATAATGGCATTCATTTTTACCAAACGAGTATGAGCTGAAGAAAGTGTCTCCATCCACACCC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU436598 lncRNA downstream 147846 3093137 ~ 3093435 (-) True G381902
TU436577 lncRNA downstream 148968 3090800 ~ 3092313 (-) True G381887
TU436597 lncRNA downstream 151225 3089723 ~ 3090056 (-) True G381901
TU436595 lncRNA downstream 151278 3089723 ~ 3090003 (-) False G381901
TU436593 lncRNA downstream 151328 3089654 ~ 3089953 (-) False G381901
TU436614 lncRNA upstream 22239 3263754 ~ 3264236 (-) True G381918
TU436631 lncRNA upstream 118324 3359839 ~ 3360241 (-) True G381931
TU436545 lncRNA upstream 123799 3365314 ~ 3366132 (-) True G381855
TU436651 lncRNA upstream 232709 3474224 ~ 3474437 (-) True G381951
TU436661 lncRNA upstream 248903 3490418 ~ 3490630 (-) True G381961
CI01000189_03231665_03237461.mRNA mRNA downstream 2085 3230790 ~ 3239196 (-) True CI01000189_03231665_03237461
CI01000189_03165381_03189571.mRNA mRNA downstream 51710 3164466 ~ 3189571 (-) True CI01000189_03165381_03189571
CI01000189_03130245_03141782.mRNA mRNA downstream 99499 3129423 ~ 3141782 (-) True CI01000189_03130245_03141782
CI01000189_03126316_03126839.mRNA mRNA downstream 114282 3126112 ~ 3126999 (-) True CI01000189_03126316_03126839
CI01000189_03114741_03118058.mRNA mRNA downstream 123223 3113951 ~ 3118058 (-) True CI01000189_03114741_03118058
CI01000189_03255223_03258558.mRNA mRNA upstream 13427 3254942 ~ 3258558 (-) True CI01000189_03255223_03258558
CI01000189_03259755_03261745.mRNA mRNA upstream 17842 3259357 ~ 3261745 (-) True CI01000189_03259755_03261745
CI01000189_03294767_03307517.mRNA mRNA upstream 52834 3294349 ~ 3307855 (-) True CI01000189_03294767_03307517
CI01000189_03335757_03343285.mRNA mRNA upstream 93858 3335373 ~ 3343285 (-) True CI01000189_03335757_03343285
CI01000189_03367583_03403144.mRNA mRNA upstream 125270 3366785 ~ 3403144 (-) True CI01000189_03367583_03403144
TU435927 other downstream 234837 2998873 ~ 3006444 (-) True G381317
TU435899 other downstream 277827 2959108 ~ 2961667 (-) True G381299
TU434639 other downstream 2342841 894220 ~ 898440 (-) True G380177
TU434342 other downstream 2475904 753257 ~ 764109 (-) True G379912
TU436781 other upstream 589112 3830627 ~ 3832613 (-) True G382060
TU436773 other upstream 644047 3885562 ~ 3892909 (-) True G382052
TU436879 other upstream 904075 4145590 ~ 4146084 (-) True G382153

Expression Profile