RNA id: TU464044



Basic Information


Item Value
RNA id TU464044
length 407
lncRNA type read_through
GC content 0.45
exon number 2
gene id G403707
representative True

Chromosome Information


Item Value
chromosome id CI01000299
NCBI id null
chromosome length 6567443
location 60302 ~ 162916 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


ATTTTTAGAAATCTTGGCCAACCGAAAAGTATGAACATGAAAAGTATGAGCATGTACAGCACTCAATACTTAGTTGGGGCTCCTTTTGCCTGAATTACTGCAGCAATGCGGCGTGGCATGGAGTCGATCAGTCTGTGGCACTGCTCAGGTGTTATAAGAGCTCAGGTTGCTCTGATAGTGGCCTTCAGCTCTTCTGCATTGTTGGGTCTGGCATATCGCATCTTCCTCTTCACAATACCCCATAGATTTTCTATGGGGTTAAGGTCAGGTGAGTTTGCTGGCCAATCAAGCACAGTAACACCATGGTCATTGAACCAGCTTTTGATACCTTTGGCAGTGTGGACAGGTGCCAAATCCTGCTGGAAAATGAAATCAGCATCTCCATAAAGCTTGTCAGCAGAAAGAAG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU464098 lncRNA upstream 71236 234040 ~ 234262 (-) True G403737
TU464136 lncRNA upstream 76733 239537 ~ 239755 (-) True G403772
TU464099 lncRNA upstream 77409 240213 ~ 240461 (-) True G403738
TU464137 lncRNA upstream 78346 241150 ~ 242770 (-) True G403773
TU464138 lncRNA upstream 80022 242826 ~ 243621 (-) True G403774
CI01000299_00169255_00170695.mRNA mRNA upstream 6419 169223 ~ 170986 (-) True CI01000299_00169255_00170695
CI01000299_00185106_00209299.mRNA mRNA upstream 21970 184774 ~ 209299 (-) True CI01000299_00185106_00209299
CI01000299_00448948_00449565.mRNA mRNA upstream 286059 448863 ~ 449757 (-) True CI01000299_00448948_00449565
CI01000299_00452374_00452868.mRNA mRNA upstream 288537 451341 ~ 452868 (-) True CI01000299_00452374_00452868
CI01000299_00670925_00672195.mRNA mRNA upstream 507876 670680 ~ 673625 (-) False CI01000299_00670925_00672195
TU464604 other upstream 508030 670834 ~ 672856 (-) True CI01000299_00670925_00672195
TU464792 other upstream 907803 1070607 ~ 1075891 (-) True G404372
TU465225 other upstream 1496851 1659655 ~ 1660000 (-) True G404784
TU465428 other upstream 1692835 1855639 ~ 1880988 (-) True G404976
TU465509 other upstream 1854883 2017687 ~ 2018050 (-) True G405053

Expression Profile