RNA id: TU464093


Basic Information

Item Value
RNA id TU464093
length 477
lncRNA type antisense_over
GC content 0.30
exon number 3
gene id G403734
representative False

Chromosome Information

Item Value
chromosome id CI01000299
NCBI id null
chromosome length 6567443
location 254668 ~ 331840 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

GTCTTTATTGTTGTGTTGAATGAAACCATATTCACAATCCATTTACCATGTGGAAGAGGGTAAATGTTCACTTAAAAAAATATAAGATCAATGATGAAAGTTAAAAAGGCAAACCCTTAGTTCACATGGCAAGGCAGATTCATAAATGATTCCATAAATGATCGTCTGAAGGGTTGTTGAGTTTTTGTGTATTTTGTGTGTGTGTGTGTGTGTGCATCTATTCCATCTCATCTGCTGTAATATTCACAAATAATGATGTTTTAGCCATGCATATGACCGCTAAATCAACATACTGTAAGTTTGCCATCTTTTATATAAACTACACACAACCATCTTGAATTGTTTCAATACATTTTTTTTTTTTTTCTCACACATTTTTACATTTCCGGATGATCTTATGGATCACAGACGTGATGGTCTGAAGAAGAATTGCTCTAAAAAAAAAAAAAAAAAAAAAAAAAAATTTAAAATAAAATT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU464165 lncRNA downstream 8268 288684 ~ 288993 (-) True G403801
TU464096 lncRNA downstream 10067 285038 ~ 287194 (-) True G403735
TU464148 lncRNA downstream 39597 256612 ~ 257664 (-) True G403784
TU464146 lncRNA downstream 43402 253530 ~ 253859 (-) True G403782
TU464145 lncRNA downstream 45058 251838 ~ 252203 (-) True G403781
TU464208 lncRNA upstream 30569 362409 ~ 362696 (-) True G403820
TU464209 lncRNA upstream 31053 362893 ~ 363318 (-) True G403821
TU464211 lncRNA upstream 32307 364147 ~ 376471 (-) True G403822
TU464245 lncRNA upstream 92286 424126 ~ 424334 (-) True G403853
TU464246 lncRNA upstream 93059 424899 ~ 425153 (-) True G403854
CI01000299_00185106_00209299.mRNA mRNA downstream 87962 184774 ~ 209299 (-) True CI01000299_00185106_00209299
CI01000299_00169255_00170695.mRNA mRNA downstream 126275 169223 ~ 170986 (-) True CI01000299_00169255_00170695
CI01000299_00448948_00449565.mRNA mRNA upstream 117023 448863 ~ 449757 (-) True CI01000299_00448948_00449565
CI01000299_00452374_00452868.mRNA mRNA upstream 119501 451341 ~ 452868 (-) True CI01000299_00452374_00452868
CI01000299_00670925_00672195.mRNA mRNA upstream 338840 670680 ~ 673625 (-) False CI01000299_00670925_00672195
CI01000299_01003547_01034507.mRNA mRNA upstream 671479 1003319 ~ 1034812 (-) True CI01000299_01003547_01034507
CI01000299_01057889_01063623.mRNA mRNA upstream 725980 1057820 ~ 1063623 (-) True CI01000299_01057889_01063623
TU464604 other upstream 338994 670834 ~ 672856 (-) True CI01000299_00670925_00672195
TU464792 other upstream 738767 1070607 ~ 1075891 (-) True G404372
TU465225 other upstream 1327815 1659655 ~ 1660000 (-) True G404784
TU465428 other upstream 1523799 1855639 ~ 1880988 (-) True G404976
TU465509 other upstream 1685847 2017687 ~ 2018050 (-) True G405053

Expression Profile