RNA id: TU492918


Basic Information

Item Value
RNA id TU492918
length 223
lncRNA type inter_gene
GC content 0.34
exon number 1
gene id G429303
representative True

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 17825442 ~ 17825664 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

CGTCATTCGTGTCACGTAACACACGGCAGCCACAATAACACTGTATGACAGATGTATCGCTATTATTTTGTTTTTCATTTTTTTATTTAAAATATTCACAGACTTGCTTACCATGTCATCAACTATCTGATATTCCGATTCCCAAATATGACTAAATGAGTGTGTTTTGTAGTTTAAAAACCTTTATAAATGATCTTTATCTTGATCTATAACGCGAGACGGG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU492916 lncRNA downstream 3039 17822159 ~ 17822403 (-) True G429301
TU492915 lncRNA downstream 4219 17820760 ~ 17821223 (-) True G429300
TU492831 lncRNA downstream 30995 17718946 ~ 17794447 (-) True G429224
TU492809 lncRNA downstream 121299 17659874 ~ 17704143 (-) True G429202
TU492827 lncRNA downstream 256625 17565702 ~ 17568817 (-) True G429220
TU492920 lncRNA upstream 2337 17828001 ~ 17828552 (-) True G429305
TU492931 lncRNA upstream 74002 17899666 ~ 17899895 (-) True G429316
TU492936 lncRNA upstream 89927 17915591 ~ 17915894 (-) True G429321
TU492937 lncRNA upstream 90247 17915911 ~ 17916117 (-) True G429322
TU493003 lncRNA upstream 153265 17978929 ~ 17979236 (-) True G429382
CI01000304_17776984_17798369.mRNA mRNA downstream 27073 17776913 ~ 17798369 (-) True CI01000304_17776984_17798369
CI01000304_17761838_17774880.mRNA mRNA downstream 50562 17761550 ~ 17774880 (-) True CI01000304_17761838_17774880
CI01000304_17753888_17759116.mRNA mRNA downstream 66326 17753723 ~ 17759116 (-) True CI01000304_17753888_17759116
CI01000304_17748958_17752035.mRNA mRNA downstream 73407 17748386 ~ 17752035 (-) True CI01000304_17748958_17752035
CI01000304_17722987_17728462.mRNA mRNA downstream 96877 17721207 ~ 17728565 (-) True CI01000304_17722987_17728462
CI01000304_17837247_17882808.mRNA mRNA upstream 11583 17837247 ~ 17883960 (-) True CI01000304_17837247_17882808
CI01000304_18007357_18007779.mRNA mRNA upstream 181391 18007055 ~ 18008022 (-) True CI01000304_18007357_18007779
CI01000304_18010568_18011800.mRNA mRNA upstream 184590 18010254 ~ 18011834 (-) True CI01000304_18010568_18011800
CI01000304_18018841_18019759.mRNA mRNA upstream 193177 18018841 ~ 18020494 (-) True CI01000304_18018841_18019759
CI01000304_18021327_18022049.mRNA mRNA upstream 195387 18021051 ~ 18022109 (-) True CI01000304_18021327_18022049
TU492202 other downstream 958204 16867107 ~ 16867238 (-) True G428668
TU492197 other downstream 1044483 16780110 ~ 16780959 (-) True G428665
TU490768 other downstream 2564037 15258964 ~ 15261405 (-) True G427376
TU490815 other downstream 3463550 14361448 ~ 14361892 (-) True G427423
TU490754 other downstream 3537838 14283671 ~ 14286873 (-) True G427362
TU492948 other upstream 98199 17923863 ~ 17924684 (-) True G429331
TU493132 other upstream 412055 18237719 ~ 18238319 (-) True G429499
TU493327 other upstream 760778 18586442 ~ 18591856 (-) False G429673
TU493326 other upstream 763662 18589326 ~ 18591856 (-) True G429673

Expression Profile