RNA id: TU503641



Basic Information


Item Value
RNA id TU503641
length 288
lncRNA type antisense_over
GC content 0.45
exon number 2
gene id G438824
representative True

Chromosome Information


Item Value
chromosome id CI01000310
NCBI id null
chromosome length 5141163
location 33017 ~ 33792 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


GTCCAGTCTGTAGTTTGGATCAGAGAGCAGCTTGACTAATGATTGTCCTGGGTGATTGTAGCTCAGATCCAGCTCTCTCAGATGTGAAGGGTTTGAATTCAGAGCTGAAGCCAGATAACCTCAGTATGTTAAGATGGCAGTGTGAACTCTTCAGTCCATTAGAGAGAGACTTCACTCCTGAAACCAGCAGGGCATTGTTACTCAGGTCCAGCTCTCTCAGTGAGTTTGAGGATTGTAGAGATGAAGACAAACTTTCACAGCACTGATCAGTGAGATTACAGTCAGCGA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU503637 lncRNA upstream 1063 31419 ~ 31954 (+) True G438823
TU503632 lncRNA upstream 9950 22801 ~ 23067 (+) True G438818
TU503642 lncRNA downstream 2099 35891 ~ 36184 (+) True G438825
TU503647 lncRNA downstream 8603 42395 ~ 43534 (+) True G438828
TU503651 lncRNA downstream 15980 49772 ~ 49972 (+) True G438832
TU503653 lncRNA downstream 19400 53192 ~ 53459 (+) True G438834
TU503666 lncRNA downstream 27793 61585 ~ 61974 (+) True G438847
CI01000310_00003244_00012743.mRNA mRNA upstream 20103 3244 ~ 12914 (+) True CI01000310_00003244_00012743
CI01000310_00138858_00147748.mRNA mRNA downstream 104755 138547 ~ 147755 (+) True CI01000310_00138858_00147748
CI01000310_00215248_00279025.mRNA mRNA downstream 181456 215248 ~ 279648 (+) False CI01000310_00215248_00279025
CI01000310_00298547_00317035.mRNA mRNA downstream 264755 298547 ~ 318355 (+) True CI01000310_00298547_00317035
CI01000310_00495852_00504711.mRNA mRNA downstream 462060 495852 ~ 504711 (+) True CI01000310_00495852_00504711
CI01000310_00513998_00524767.mRNA mRNA downstream 480206 513998 ~ 525606 (+) True CI01000310_00513998_00524767
TU504002 other downstream 614774 648566 ~ 649553 (+) False CI01000310_00648731_00650082
TU503981 other downstream 616166 651976 ~ 653356 (+) False G439115
TU503984 other downstream 616166 651976 ~ 653337 (+) True G439115
TU503983 other downstream 616200 651976 ~ 653356 (+) True G439115
TU504536 other downstream 1188214 1222006 ~ 1239405 (+) True G439538

Expression Profile