RNA id: TU503651



Basic Information


Item Value
RNA id TU503651
length 201
lncRNA type inter_gene
GC content 0.35
exon number 1
gene id G438832
representative True

Chromosome Information


Item Value
chromosome id CI01000310
NCBI id null
chromosome length 5141163
location 49772 ~ 49972 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


GCTTCTGCTGATCAGTGTTTACATGTGAGTAAAAGCCTAAATTAAATCTGTTCATCATAAAAAGTGATTGAGTTTCATCAGAATATTTTGACTAAACCACTCGATTTCATATGGATTAGTTTTACGATCTCTTTATGAACTTTTTGGAGCGTCAAAATGGTCATTGCAAAGGCAGTCAATGGAGGGACAGAAATCTCTCAG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU503647 lncRNA upstream 6238 42395 ~ 43534 (+) True G438828
TU503642 lncRNA upstream 13588 35891 ~ 36184 (+) True G438825
TU503641 lncRNA upstream 15980 33017 ~ 33792 (+) True G438824
TU503637 lncRNA upstream 17818 31419 ~ 31954 (+) True G438823
TU503632 lncRNA upstream 26705 22801 ~ 23067 (+) True G438818
TU503653 lncRNA downstream 3220 53192 ~ 53459 (+) True G438834
TU503666 lncRNA downstream 11613 61585 ~ 61974 (+) True G438847
TU503701 lncRNA downstream 84090 134062 ~ 134390 (+) True G438881
TU503717 lncRNA downstream 143077 193049 ~ 217248 (+) True G438896
TU503735 lncRNA downstream 179824 229796 ~ 231369 (+) True G438913
CI01000310_00003244_00012743.mRNA mRNA upstream 36858 3244 ~ 12914 (+) True CI01000310_00003244_00012743
CI01000310_00138858_00147748.mRNA mRNA downstream 88575 138547 ~ 147755 (+) True CI01000310_00138858_00147748
CI01000310_00215248_00279025.mRNA mRNA downstream 165276 215248 ~ 279648 (+) False CI01000310_00215248_00279025
CI01000310_00298547_00317035.mRNA mRNA downstream 248575 298547 ~ 318355 (+) True CI01000310_00298547_00317035
CI01000310_00495852_00504711.mRNA mRNA downstream 445880 495852 ~ 504711 (+) True CI01000310_00495852_00504711
CI01000310_00513998_00524767.mRNA mRNA downstream 464026 513998 ~ 525606 (+) True CI01000310_00513998_00524767
TU504002 other downstream 598594 648566 ~ 649553 (+) False CI01000310_00648731_00650082
TU503981 other downstream 599986 651976 ~ 653356 (+) False G439115
TU503984 other downstream 599986 651976 ~ 653337 (+) True G439115
TU503983 other downstream 600020 651976 ~ 653356 (+) True G439115
TU504536 other downstream 1172034 1222006 ~ 1239405 (+) True G439538

Expression Profile