RNA id: TCONS_00021143


Basic Information

Item Value
RNA id TCONS_00021143
length 508
RNA type processed_transcript
GC content 0.41
exon number 5
gene id XLOC_010803
representative False

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 31428488 ~ 31452507 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

CCTTTATTATTAGAAAACACACCTGCCATTCAGGCCGAGAGTATTTGCTGGTTTCTAAGGCCTCATCTCCAGTGTCCCTTAACTGCTCACCTGTGACCCTATTGTCCAGATCAAGCATTTAAAGCCACAAATGACACATGAACCCCTCAGAAGGACATCAGCCCTCAGAATGAAGCTGATCAGCAGCTCCCTGACTCTTCTAGTCTTTATAAATGCTGTGTTTTCAGCAGCTATGAGAGATGGGGGTGAAGATTTGATACATTTTCTTAAGGATGCCTTTGAAATGAATCAGACTCTGGACCAAACTGAACCCACACAGCTCTCAGGTCTGTTAAATTTGATTCAGTCAGGGATGAATTATATAACGCTGTACCGATGAAGATTATCAGAAgtgaacGTGAGAATCAGAAAGAAAGTGAGTTGTGCAACAGTTTGATGGTTTTTGACCTCAGGtgagttttcttttgttttacttAGAAATTAGCCTAGTACCTGAAATGATTCTGGA

Function

GO: NA

KEGG: NA

ZFIN:

id description
ZDB-GENE-030131-2476 Is expressed in asteriscus.

Ensembl:

ensembl_id ENSDART00000134036

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00021141 lncRNA downstream 25161 31385083 ~ 31407686 (-) True XLOC_010802
TCONS_00022180 lncRNA downstream 188166 31243780 ~ 31244681 (-) True XLOC_010800
TCONS_00022179 lncRNA downstream 263465 31166986 ~ 31169382 (-) True XLOC_010798
TCONS_00022178 lncRNA downstream 644302 30758360 ~ 30788545 (-) False XLOC_010792
TCONS_00021117 lncRNA downstream 678890 30737535 ~ 30753957 (-) False XLOC_010792
TCONS_00021153 lncRNA upstream 73807 31508827 ~ 31511707 (-) True XLOC_010805
TCONS_00021161 lncRNA upstream 191474 31626494 ~ 31628157 (-) True XLOC_010809
TCONS_00021810 lncRNA upstream 325093 31760113 ~ 31761131 (-) True XLOC_010817
TCONS_00021176 lncRNA upstream 443665 31878685 ~ 31881623 (-) True XLOC_010820
TCONS_00021811 lncRNA upstream 447128 31882148 ~ 31892032 (-) True XLOC_010821
TCONS_00021138 mRNA downstream 81428 31258283 ~ 31351419 (-) False XLOC_010801
TCONS_00021137 mRNA downstream 81428 31258283 ~ 31351419 (-) False XLOC_010801
TCONS_00021140 mRNA downstream 90491 31302882 ~ 31342356 (-) True XLOC_010801
TCONS_00021139 mRNA downstream 147925 31259024 ~ 31284922 (-) False XLOC_010801
TCONS_00021136 mRNA downstream 244132 31186083 ~ 31188715 (-) True XLOC_010799
TCONS_00021145 mRNA upstream 1737 31436757 ~ 31452418 (-) False XLOC_010803
TCONS_00021146 mRNA upstream 2825 31437845 ~ 31445781 (-) False XLOC_010803
TCONS_00021147 mRNA upstream 8329 31443349 ~ 31452507 (-) False XLOC_010803
TCONS_00021148 mRNA upstream 9819 31444839 ~ 31451720 (-) False XLOC_010803
TCONS_00021149 mRNA upstream 9823 31444843 ~ 31452416 (-) True XLOC_010803
TCONS_00021122 other downstream 644302 30772319 ~ 30788545 (-) True XLOC_010792
TCONS_00021121 other downstream 646735 30772169 ~ 30786112 (-) False XLOC_010792
TCONS_00021118 other downstream 657921 30740651 ~ 30774926 (-) False XLOC_010792
TCONS_00021115 other downstream 657936 30737535 ~ 30774911 (-) False XLOC_010792
TCONS_00021120 other downstream 660415 30758360 ~ 30772432 (-) False XLOC_010792
TCONS_00021159 other upstream 188955 31623975 ~ 31628687 (-) False XLOC_010809
TCONS_00021160 other upstream 190982 31626002 ~ 31628184 (-) False XLOC_010809
TCONS_00021163 other upstream 211370 31646390 ~ 31651183 (-) True XLOC_010811
TCONS_00021178 other upstream 470836 31905856 ~ 31914700 (-) True XLOC_010822
TCONS_00021196 other upstream 681651 32116671 ~ 32119603 (-) True XLOC_010830

Expression Profile

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