Gene
RNA
| Item | Value |
|---|---|
| RNA id | CI01180000_07100974_07142837.mRNA |
| length | 6414 |
| RNA type | mRNA |
| GC content | 0.51 |
| exon number | 42 |
| gene id | CI01180000_07100974_07142837 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CI01180000 |
| NCBI id | null |
| chromosome length | 11503085 |
| location | 7100974 ~ 7142960 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| species | grasscarp (Ctenopharyngodon idella) |
| id | name | namespace |
|---|---|---|
| GO:0032012 | regulation of ARF protein signal transduction | biological_process |
| id | description |
|---|---|
| K18443 | GBF1; golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU802745 | lncRNA | upstream | 110474 | 6986833 ~ 6990500 (+) | True | G681758 |
| TU802746 | lncRNA | upstream | 110626 | 6985025 ~ 6990348 (+) | False | G681758 |
| TU802744 | lncRNA | upstream | 115105 | 6985025 ~ 6985869 (+) | False | G681758 |
| TU802783 | lncRNA | upstream | 116300 | 6984470 ~ 6984674 (+) | True | G681791 |
| TU802736 | lncRNA | upstream | 209890 | 6890884 ~ 6891084 (+) | True | G681755 |
| TU802806 | lncRNA | downstream | 17782 | 7160742 ~ 7161014 (+) | True | G681813 |
| TU802923 | lncRNA | downstream | 47990 | 7190950 ~ 7191154 (+) | True | G681898 |
| TU802924 | lncRNA | downstream | 53345 | 7196305 ~ 7196527 (+) | True | G681899 |
| TU802932 | lncRNA | downstream | 77619 | 7220579 ~ 7220795 (+) | True | G681907 |
| TU802933 | lncRNA | downstream | 78004 | 7220964 ~ 7221190 (+) | True | G681908 |
| CI01180000_07064360_07069339.mRNA | mRNA | upstream | 30396 | 7064257 ~ 7070578 (+) | True | CI01180000_07064360_07069339 |
| CI01180000_07023336_07025503.mRNA | mRNA | upstream | 75367 | 7023336 ~ 7025607 (+) | True | CI01180000_07023336_07025503 |
| CI01180000_06992692_07007925.mRNA | mRNA | upstream | 92453 | 6992692 ~ 7008521 (+) | True | CI01180000_06992692_07007925 |
| CI01180000_06911043_06921434.mRNA | mRNA | upstream | 178326 | 6910996 ~ 6922648 (+) | True | CI01180000_06911043_06921434 |
| CI01180000_06839627_06853120.mRNA | mRNA | upstream | 247267 | 6839001 ~ 6853707 (+) | True | CI01180000_06839627_06853120 |
| CI01180000_07222655_07236693.mRNA | mRNA | downstream | 79663 | 7222623 ~ 7237422 (+) | True | CI01180000_07222655_07236693 |
| CI01180000_07279496_07302239.mRNA | mRNA | downstream | 136418 | 7279378 ~ 7303896 (+) | True | CI01180000_07279496_07302239 |
| CI01180000_07309116_07321305.mRNA | mRNA | downstream | 165262 | 7308222 ~ 7321353 (+) | True | CI01180000_07309116_07321305 |
| CI01180000_07335342_07349850.mRNA | mRNA | downstream | 192334 | 7335294 ~ 7350114 (+) | True | CI01180000_07335342_07349850 |
| CI01180000_07403482_07412752.mRNA | mRNA | downstream | 260522 | 7403482 ~ 7413190 (+) | False | CI01180000_07403482_07412752 |
| TU802641 | other | upstream | 441428 | 6655846 ~ 6659546 (+) | True | G681667 |
| TU802663 | other | upstream | 465985 | 6632908 ~ 6634989 (+) | True | G681686 |
| TU802553 | other | upstream | 621975 | 6473035 ~ 6478999 (+) | True | G681592 |
| TU802202 | other | upstream | 1727212 | 5370410 ~ 5373762 (+) | True | G681268 |
| TU802064 | other | upstream | 2315343 | 4783305 ~ 4785631 (+) | True | G681137 |
| TU802812 | other | downstream | 260187 | 7403147 ~ 7469605 (+) | True | G681817 |
| TU802830 | other | downstream | 520463 | 7663423 ~ 7694381 (+) | True | G681822 |
| TU802826 | other | downstream | 551363 | 7694323 ~ 7694381 (+) | True | G681822 |
| TU803281 | other | downstream | 1225225 | 8368185 ~ 8368935 (+) | True | G682232 |
| TU803553 | other | downstream | 1893457 | 9036417 ~ 9038892 (+) | True | CI01180000_09036547_09038313 |
| species | RNA id | representative | length | rna type | GC content | exon number | chromosome id | location |
|---|---|---|---|---|---|---|---|---|
| zebrafish (Danio rerio) | TCONS_00011421 | True | 5208 | mRNA | 0.52 | 36 | NC_007124.7 | 7665890 ~ 7745408 (+) |
| bowfin (Amia calva) | AMCG00003113 | True | 3195 | mRNA | 0.53 | 21 | CM030139.1 | 11807910 ~ 11821314 (-) |
