RNA id: TU802341


Basic Information

Item Value
RNA id TU802341
length 205
lncRNA type inter_gene
GC content 0.31
exon number 1
gene id G681400
representative True

Chromosome Information

Item Value
chromosome id CI01180000
NCBI id null
chromosome length 11503085
location 5499213 ~ 5499417 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

CAAGTACAACTGAATTAGCGAATTCCTTCAAATCTCAAGGTCATACAATTTTCCTGTCAGGAAAAAAAGTAGCTTTTTTGTTGAACTCATCTGAGCTATGGCAATTTAATTTAAAATTCCTGTGAATCATCACTCTTTATAATAAAATACTTAGGGAATTTTTATTCCTGAAATCATTTGGCAGATATGAGCCAAAGACATTTTT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU802156 lncRNA upstream 59898 5433842 ~ 5439315 (+) True G681222
TU802320 lncRNA upstream 116562 5374429 ~ 5382651 (+) True G681379
TU802314 lncRNA upstream 139267 5359139 ~ 5359946 (+) True G681373
TU802293 lncRNA upstream 194383 5304622 ~ 5304830 (+) True G681353
TU802290 lncRNA upstream 198040 5300942 ~ 5301173 (+) True G681350
TU802161 lncRNA downstream 247 5499664 ~ 5502130 (+) True G681227
TU802346 lncRNA downstream 20820 5520237 ~ 5521359 (+) True G681405
TU802203 lncRNA downstream 27540 5526957 ~ 5532092 (+) True G681269
TU802369 lncRNA downstream 83683 5583100 ~ 5583367 (+) True G681425
TU802370 lncRNA downstream 84100 5583517 ~ 5583720 (+) True G681426
CI01180000_05460865_05464029.mRNA mRNA upstream 34680 5460865 ~ 5464533 (+) True CI01180000_05460865_05464029
CI01180000_05361478_05362402.mRNA mRNA upstream 136707 5361299 ~ 5362506 (+) True CI01180000_05361478_05362402
CI01180000_05307085_05313251.mRNA mRNA upstream 185824 5306869 ~ 5313389 (+) True CI01180000_05307085_05313251
CI01180000_05276728_05284341.mRNA mRNA upstream 214646 5276418 ~ 5284567 (+) True CI01180000_05276728_05284341
CI01180000_05236666_05242597.mRNA mRNA upstream 256465 5235723 ~ 5242748 (+) True CI01180000_05236666_05242597
CI01180000_05552106_05558265.mRNA mRNA downstream 52458 5551875 ~ 5559075 (+) True CI01180000_05552106_05558265
CI01180000_05566677_05569815.mRNA mRNA downstream 67260 5566677 ~ 5569854 (+) True CI01180000_05566677_05569815
CI01180000_05587131_05604001.mRNA mRNA downstream 87630 5587047 ~ 5605024 (+) True CI01180000_05587131_05604001
CI01180000_05605783_05625064.mRNA mRNA downstream 106366 5605783 ~ 5625111 (+) False CI01180000_05605783_05625064
CI01180000_05721160_05745421.mRNA mRNA downstream 221683 5721100 ~ 5745673 (+) True CI01180000_05721160_05745421
TU802202 other upstream 125451 5370410 ~ 5373762 (+) True G681268
TU802064 other upstream 713582 4783305 ~ 4785631 (+) True G681137
TU801653 other upstream 1714772 3765691 ~ 3784441 (+) True G680736
TU801631 other upstream 1926816 3553277 ~ 3563250 (+) False G680723
TU802553 other downstream 973618 6473035 ~ 6478999 (+) True G681592
TU802663 other downstream 1133491 6632908 ~ 6634989 (+) True G681686
TU802641 other downstream 1156429 6655846 ~ 6659546 (+) True G681667
TU802812 other downstream 1903730 7403147 ~ 7469605 (+) True G681817
TU802830 other downstream 2164006 7663423 ~ 7694381 (+) True G681822

Expression Profile