RNA id: TCONS_00024544


Basic Information

Item Value
RNA id TCONS_00024544
length 270
lncRNA type inter_gene
GC content 0.49
exon number 2
gene id XLOC_012245
representative True

Chromosome Information

Item Value
chromosome id NC_007128.7
NCBI id CM002901.2
chromosome length 53461100
location 35554571 ~ 35846256 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

CTCTGCTGACCCTTTCTTTGCTTTCCCCCCTCTCTTCTCAGATTCTCCTCATGCTGTGTCATCTGAATGCTGTGAGGAGCTGGTATGTAGAGGGAAGCGAGTCTGGTATTCCCCAAACTCAGCAAACCAAAAACGGGCAGagctgACCTACTGATCTAGACCGTTTCTCTCAGCTGTTTTGGCTGTGGAATAGTGACCTGATTCTGCAGCGTGAAGGTAAATAAACAGAGGTGGGGAATAATATTGCGTAGGATCATAAGCAAGGGGAGG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00024129 lncRNA downstream 116773 35554571 ~ 35589737 (-) False XLOC_012245
TCONS_00024122 lncRNA downstream 629780 34998971 ~ 35076730 (-) True XLOC_012240
TCONS_00024117 lncRNA downstream 900752 34706779 ~ 34805758 (-) False XLOC_012238
TCONS_00024944 lncRNA downstream 900772 34741156 ~ 34805738 (-) False XLOC_012238
TCONS_00024945 lncRNA downstream 900772 34745456 ~ 34805738 (-) True XLOC_012238
TCONS_00024545 lncRNA upstream 143984 35880094 ~ 35881841 (-) False XLOC_012247
TCONS_00024947 lncRNA upstream 144620 35880730 ~ 35881741 (-) True XLOC_012247
TCONS_00024132 lncRNA upstream 164955 35901065 ~ 35962097 (-) False XLOC_012248
TCONS_00024133 lncRNA upstream 225540 35961650 ~ 36053935 (-) False XLOC_012248
TCONS_00024948 lncRNA upstream 274665 36010775 ~ 36053539 (-) False XLOC_012248
TCONS_00024128 mRNA downstream 345188 35357451 ~ 35361322 (-) True XLOC_012244
TCONS_00024127 mRNA downstream 353820 35285876 ~ 35352690 (-) True XLOC_012243
TCONS_00024126 mRNA downstream 427088 35250157 ~ 35279422 (-) True XLOC_012242
TCONS_00024125 mRNA downstream 427747 35247497 ~ 35278763 (-) False XLOC_012242
TCONS_00024123 mRNA downstream 468151 35225614 ~ 35238359 (-) False XLOC_012241
TCONS_00024131 mRNA upstream 142434 35878544 ~ 35881841 (-) False XLOC_012247
TCONS_00024136 mRNA upstream 747177 36483287 ~ 36483787 (-) False XLOC_012250
TCONS_00024137 mRNA upstream 747283 36483393 ~ 36513936 (-) True XLOC_012250
TCONS_00024138 mRNA upstream 780585 36516695 ~ 36529449 (-) False XLOC_012251
TCONS_00024139 mRNA upstream 780587 36516697 ~ 36529016 (-) True XLOC_012251
TCONS_00024130 other downstream 88406 35617986 ~ 35618104 (-) True XLOC_012246
TCONS_00024124 other downstream 468198 35228588 ~ 35238312 (-) True XLOC_012241
TCONS_00024114 other downstream 1993333 33699379 ~ 33713177 (-) False XLOC_012236
TCONS_00024113 other downstream 2001046 33691698 ~ 33705464 (-) False XLOC_012236
TCONS_00024101 other downstream 2467224 33238317 ~ 33239286 (-) True XLOC_012231
TCONS_00024140 other upstream 898962 36635072 ~ 36635189 (-) True XLOC_012252
TCONS_00024159 other upstream 1214328 36950438 ~ 36950555 (-) True XLOC_012260
TCONS_00024168 other upstream 1573219 37309329 ~ 37309446 (-) True XLOC_012265
TCONS_00024169 other upstream 1574552 37310662 ~ 37311810 (-) False XLOC_012266
TCONS_00024174 other upstream 1653893 37390003 ~ 37390117 (-) True XLOC_012269

Expression Profile

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