Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00026379 |
| length | 1457 |
| RNA type | mRNA |
| GC content | 0.47 |
| exon number | 5 |
| gene id | XLOC_013341 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007129.7 |
| NCBI id | CM002902.2 |
| chromosome length | 51023478 |
| location | 17075985 ~ 17147803 (-) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0006954 | inflammatory response | biological_process |
| GO:0071222 | cellular response to lipopolysaccharide | biological_process |
| GO:0005576 | extracellular region | cellular_component |
| GO:0005125 | cytokine activity | molecular_function |
| id | description |
|---|---|
| ko04060 | Cytokine-cytokine receptor interaction |
| ko04657 | IL-17 signaling pathway |
| ko04052 | Cytokines and growth factors |
| id | description |
|---|---|
| ZDB-GENE-050419-13 | Predicted to enable metal ion binding activity. Predicted to be located in nucleus. Orthologous to human ZC3H18 (zinc finger CCCH-type containing 18). |
| ensembl_id | ENSDART00000135597 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00026958 | lncRNA | downstream | 701846 | 16372210 ~ 16377341 (-) | True | XLOC_013329 |
| TCONS_00026348 | lncRNA | downstream | 771250 | 16258787 ~ 16307937 (-) | False | XLOC_013327 |
| TCONS_00027284 | lncRNA | downstream | 771254 | 16296881 ~ 16307933 (-) | True | XLOC_013327 |
| TCONS_00027282 | lncRNA | downstream | 813297 | 16251074 ~ 16265890 (-) | False | XLOC_013327 |
| TCONS_00026959 | lncRNA | upstream | 404183 | 17491321 ~ 17492706 (-) | True | XLOC_013345 |
| TCONS_00026394 | lncRNA | upstream | 620820 | 17707958 ~ 17712667 (-) | True | XLOC_013348 |
| TCONS_00027285 | lncRNA | upstream | 690389 | 17777527 ~ 17786790 (-) | True | XLOC_013349 |
| TCONS_00027286 | lncRNA | upstream | 1024856 | 18111994 ~ 18113888 (-) | True | XLOC_013351 |
| TCONS_00026400 | lncRNA | upstream | 1464070 | 18551208 ~ 18555561 (-) | True | XLOC_013354 |
| TCONS_00026376 | mRNA | downstream | 1591 | 17076195 ~ 17077596 (-) | False | XLOC_013341 |
| TCONS_00026375 | mRNA | downstream | 1768 | 17075985 ~ 17077419 (-) | False | XLOC_013341 |
| TCONS_00026371 | mRNA | downstream | 4089 | 17032312 ~ 17075098 (-) | False | XLOC_013340 |
| TCONS_00026373 | mRNA | downstream | 4089 | 17039832 ~ 17075098 (-) | False | XLOC_013340 |
| TCONS_00026372 | mRNA | downstream | 4089 | 17039832 ~ 17075098 (-) | False | XLOC_013340 |
| TCONS_00026382 | mRNA | upstream | 183289 | 17270427 ~ 17399291 (-) | False | XLOC_013342 |
| TCONS_00026383 | mRNA | upstream | 184048 | 17271186 ~ 17399302 (-) | False | XLOC_013342 |
| TCONS_00026384 | mRNA | upstream | 184302 | 17271440 ~ 17399376 (-) | True | XLOC_013342 |
| TCONS_00026385 | mRNA | upstream | 321332 | 17408470 ~ 17415609 (-) | False | XLOC_013343 |
| TCONS_00026387 | mRNA | upstream | 326100 | 17413238 ~ 17415580 (-) | True | XLOC_013343 |
| TCONS_00026341 | other | downstream | 1203407 | 15875662 ~ 15875780 (-) | True | XLOC_013321 |
| TCONS_00026338 | other | downstream | 1468950 | 15578502 ~ 15610237 (-) | True | XLOC_013318 |
| TCONS_00026339 | other | downstream | 1490986 | 15588087 ~ 15588201 (-) | True | XLOC_013319 |
| TCONS_00026322 | other | downstream | 2042918 | 15036151 ~ 15036269 (-) | True | XLOC_013308 |
| TCONS_00026312 | other | downstream | 2208051 | 14866383 ~ 14871136 (-) | True | XLOC_013303 |
| TCONS_00026386 | other | upstream | 324732 | 17411870 ~ 17415589 (-) | False | XLOC_013343 |
| TCONS_00026401 | other | upstream | 1482103 | 18569241 ~ 18569322 (-) | True | XLOC_013355 |
| TCONS_00026402 | other | upstream | 1490336 | 18577474 ~ 18577549 (-) | True | XLOC_013356 |
| TCONS_00026403 | other | upstream | 1490676 | 18577814 ~ 18577894 (-) | True | XLOC_013357 |
| TCONS_00026408 | other | upstream | 1609069 | 18696207 ~ 18701764 (-) | True | XLOC_013360 |
