Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU46743 |
| length | 209 |
| lncRNA type | inter_gene |
| GC content | 0.35 |
| exon number | 1 |
| gene id | G41551 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 38789113 ~ 38789321 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU46589 | lncRNA | downstream | 109920 | 38678982 ~ 38679193 (-) | True | G41400 |
| TU46496 | lncRNA | downstream | 176567 | 38612340 ~ 38612546 (-) | True | G41309 |
| TU46491 | lncRNA | downstream | 179508 | 38609404 ~ 38609605 (-) | True | G41304 |
| TU46482 | lncRNA | downstream | 190305 | 38598608 ~ 38598808 (-) | True | G41295 |
| TU46475 | lncRNA | downstream | 194474 | 38594372 ~ 38594639 (-) | True | G41288 |
| TU46749 | lncRNA | upstream | 4199 | 38793520 ~ 38793733 (-) | True | G41557 |
| TU46996 | lncRNA | upstream | 180447 | 38969768 ~ 38970090 (-) | True | G41798 |
| TU47011 | lncRNA | upstream | 188331 | 38977652 ~ 38977875 (-) | True | G41813 |
| TU47018 | lncRNA | upstream | 192685 | 38982006 ~ 38982235 (-) | True | G41819 |
| TU47060 | lncRNA | upstream | 227461 | 39016782 ~ 39017550 (-) | True | G41861 |
| XR_005051684.1 | mRNA | downstream | 722508 | 38065959 ~ 38066605 (-) | False | LOC118964575 |
| XR_005051686.1 | mRNA | downstream | 727450 | 38061089 ~ 38061663 (-) | True | LOC118964577 |
| XM_036989519.1 | mRNA | downstream | 1095262 | 37688750 ~ 37693851 (-) | True | LOC118966689 |
| XM_036989509.1 | mRNA | downstream | 1101368 | 37682644 ~ 37687745 (-) | True | LOC118966688 |
| XM_036989498.1 | mRNA | downstream | 1107474 | 37676381 ~ 37681639 (-) | True | LOC118966685 |
| LOC110520456 | mRNA | upstream | 225754 | 39015075 ~ 39019091 (-) | True | LOC110520456 |
| XM_021600757.2 | mRNA | upstream | 291682 | 39081003 ~ 39084318 (-) | True | LOC110522389 |
| LOC118966691 | mRNA | upstream | 311504 | 39100825 ~ 39115097 (-) | True | LOC118966691 |
| XM_036977133.1 | mRNA | upstream | 525731 | 39315052 ~ 39336321 (-) | False | man2a2 |
| XM_036977115.1 | mRNA | upstream | 525731 | 39315052 ~ 39336324 (-) | False | man2a2 |
| TU45924 | other | downstream | 597377 | 38187488 ~ 38191736 (-) | True | G40768 |
| TU45886 | other | downstream | 663388 | 38125280 ~ 38125725 (-) | True | G40732 |
| TU45214 | other | downstream | 1072080 | 37716540 ~ 37717033 (-) | True | G40079 |
| TU43930 | other | downstream | 2278284 | 36508538 ~ 36510829 (-) | True | G38855 |
| TU43851 | other | downstream | 2380094 | 36370094 ~ 36409019 (-) | True | LOC110522187 |
| TU47067 | other | upstream | 232484 | 39021805 ~ 39022025 (-) | True | G41868 |
| TU52237 | other | upstream | 4249407 | 43038728 ~ 43129029 (-) | True | tspan9a |
| TU55610 | other | upstream | 6931484 | 45720805 ~ 45721124 (-) | True | G49774 |
| TU55801 | other | upstream | 7159637 | 45948958 ~ 45949951 (-) | True | G49962 |
| TU57229 | other | upstream | 8275453 | 47064774 ~ 47119033 (-) | False | G51214 |
