RNA id: TU67309



Basic Information


Item Value
RNA id TU67309
length 326
RNA type TUCP
GC content 0.55
exon number 1
gene id G60624
representative True

Chromosome Information


Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 55203417 ~ 55203742 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


attaaagaagctctgtttaagttagttcgcttttgggtcctcattcactcaccgtaacagaagaatccgaccaagaatggacccagcgacttcggatcctctccactcagccgtcgagatccagggagcgatgctaggcagacacgagcaggaattgtctgctgctcgacatgccgttgagaccctggccacccaagtctccaacctcacagaacaggttcaccatctccgcctcgatccaccggccacttccagggctttcgaatctccggagcccagaatcaataacccgccgtgttactctggggagcccactgaatgccgcc

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU67308 lncRNA downstream 155 55203040 ~ 55203262 (-) True G60623
TU67273 lncRNA downstream 23220 55179910 ~ 55180197 (-) True G60588
TU67265 lncRNA downstream 32691 55170415 ~ 55170726 (-) True G60580
TU67137 lncRNA downstream 122339 55071627 ~ 55081078 (-) True LOC110525476
TU67199 lncRNA downstream 133572 55069610 ~ 55069845 (-) True G60517
TU67314 lncRNA upstream 2277 55206019 ~ 55206260 (-) True G60629
TU67315 lncRNA upstream 2659 55206401 ~ 55206635 (-) True G60630
TU67321 lncRNA upstream 6275 55210017 ~ 55210342 (-) True G60636
TU67331 lncRNA upstream 11683 55215425 ~ 55215701 (-) True G60646
TU67539 lncRNA upstream 57247 55260989 ~ 55265484 (-) True G60837
XM_021605612.2 mRNA downstream 75147 55071579 ~ 55128270 (-) False LOC110525476
XM_021605620.2 mRNA downstream 75147 55071579 ~ 55128270 (-) False LOC110525476
XR_002473762.2 mRNA downstream 75147 55071579 ~ 55128270 (-) False LOC110525476
XR_005052176.1 mRNA downstream 169158 54978911 ~ 55034259 (-) True LOC118964914
XR_005052177.1 mRNA downstream 236864 54963456 ~ 54966553 (-) True LOC110525471
XM_036980645.1 mRNA upstream 540665 55744407 ~ 55801039 (-) True LOC110525505
XM_036980672.1 mRNA upstream 698155 55901897 ~ 56127796 (-) False LOC110525190
XM_021605162.2 mRNA upstream 698156 55901898 ~ 56147404 (-) False LOC110525190
XM_021605194.2 mRNA upstream 698156 55901898 ~ 56147404 (-) False LOC110525190
XM_036980680.1 mRNA upstream 698157 55901899 ~ 56000300 (-) True LOC110525190
TU67299 other downstream 9694 55193297 ~ 55193723 (-) True G60614
TU67257 other downstream 49159 55150241 ~ 55154258 (-) True G60572
TU67198 other downstream 132518 55070392 ~ 55070899 (-) True G60516
TU66641 other downstream 466173 54729131 ~ 54737244 (-) True G59978
TU65545 other downstream 1406403 53791830 ~ 53797014 (-) True G58958
TU68326 other upstream 629083 55832825 ~ 55833360 (-) False G61563
TU68495 other upstream 949688 56153430 ~ 56153918 (-) True G61715
TU68821 other upstream 1321228 56524970 ~ 56533975 (-) True G61978
TU70000 other upstream 1831925 57035667 ~ 57062848 (-) False G63093
TU69997 other upstream 1848356 57052098 ~ 57062848 (-) False G63093

Expression Profile