Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU131390 |
| length | 249 |
| lncRNA type | inter_gene |
| GC content | 0.43 |
| exon number | 2 |
| gene id | G114497 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 12918342 ~ 12919001 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU131347 | lncRNA | downstream | 27969 | 12865537 ~ 12890373 (-) | True | LOC110525147 |
| TU131376 | lncRNA | downstream | 56155 | 12861467 ~ 12862187 (-) | True | G114486 |
| TU131360 | lncRNA | downstream | 95434 | 12819520 ~ 12822908 (-) | True | G114478 |
| TU131365 | lncRNA | downstream | 97260 | 12820171 ~ 12821082 (-) | True | G114479 |
| TU131362 | lncRNA | downstream | 98209 | 12818120 ~ 12820133 (-) | False | G114478 |
| TU131398 | lncRNA | upstream | 18542 | 12937543 ~ 12937830 (-) | True | G114502 |
| TU131408 | lncRNA | upstream | 24484 | 12943485 ~ 12961942 (-) | True | G114506 |
| TU131412 | lncRNA | upstream | 68944 | 12987945 ~ 12988251 (-) | True | G114510 |
| TU131413 | lncRNA | upstream | 69419 | 12988420 ~ 12988629 (-) | True | G114511 |
| TU131415 | lncRNA | upstream | 73297 | 12992298 ~ 12992590 (-) | True | G114513 |
| XM_036938224.1 | mRNA | downstream | 27946 | 12813650 ~ 12890396 (-) | False | LOC110525147 |
| XM_036938228.1 | mRNA | downstream | 27946 | 12813650 ~ 12890396 (-) | False | LOC110525147 |
| XM_036938172.1 | mRNA | downstream | 202732 | 12683093 ~ 12715610 (-) | False | LOC118937723 |
| XM_036938186.1 | mRNA | downstream | 202732 | 12683093 ~ 12715610 (-) | False | LOC118937723 |
| XR_005035118.1 | mRNA | downstream | 202732 | 12683093 ~ 12715610 (-) | True | LOC118937723 |
| XM_036938238.1 | mRNA | upstream | 5471 | 12924472 ~ 12934534 (-) | False | pabpc1a |
| XM_036938245.1 | mRNA | upstream | 5471 | 12924472 ~ 12934534 (-) | True | pabpc1a |
| XR_005039490.1 | mRNA | upstream | 6356 | 12925357 ~ 12925439 (-) | True | LOC118944179 |
| XM_036938255.1 | mRNA | upstream | 144089 | 13063090 ~ 13083743 (-) | True | LOC110507522 |
| XM_036938296.1 | mRNA | upstream | 167168 | 13086169 ~ 13093633 (-) | False | LOC110507534 |
| TU131319 | other | downstream | 179185 | 12735314 ~ 12739157 (-) | True | G114442 |
| TU131298 | other | downstream | 209027 | 12707827 ~ 12709315 (-) | True | G114424 |
| TU131258 | other | downstream | 304662 | 12610669 ~ 12613680 (-) | True | G114402 |
| TU131242 | other | downstream | 333202 | 12584027 ~ 12585140 (-) | True | G114390 |
| TU130213 | other | downstream | 1259674 | 11626535 ~ 11658668 (-) | True | LOC110513475 |
| TU131498 | other | upstream | 173091 | 13092092 ~ 13093765 (-) | True | LOC110507534 |
| TU131755 | other | upstream | 376832 | 13295833 ~ 13323323 (-) | True | LOC110513400 |
| TU131788 | other | upstream | 411747 | 13330748 ~ 13332309 (-) | False | G114812 |
| TU131789 | other | upstream | 411747 | 13330748 ~ 13332506 (-) | False | G114812 |
| TU131790 | other | upstream | 411747 | 13330748 ~ 13332506 (-) | True | G114812 |
