RNA id: TU209359



Basic Information


Item Value
RNA id TU209359
length 229
lncRNA type intronic
GC content 0.37
exon number 1
gene id G184553
representative True

Chromosome Information


Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 75135604 ~ 75135832 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


AATCTGAGCTCTGCTCTTTCCCTGACATAGGctcaccaggtgaatccaggtgaaagctatgctcccttattgatgtcacttgttaaatccatttcaatcagtgtaaatgaaggggaggagacaggttaaagaaggatatttaagtcttgagacaattgagacatggattgtgtatgtgtgacattcagagggtgaatgggccagaaaaaatatttaagtgccattGAAC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU209354 lncRNA downstream 7617 75127775 ~ 75127987 (-) True G184548
TU209349 lncRNA downstream 12579 75122756 ~ 75123025 (-) True G184543
TU209348 lncRNA downstream 15109 75120216 ~ 75120495 (-) True G184542
TU209345 lncRNA downstream 19532 75115706 ~ 75116072 (-) True G184539
TU209329 lncRNA downstream 46408 75088883 ~ 75089196 (-) True G184523
TU209361 lncRNA upstream 762 75136594 ~ 75137150 (-) True G184555
TU209362 lncRNA upstream 1946 75137778 ~ 75138312 (-) True G184556
TU209363 lncRNA upstream 4125 75139957 ~ 75140206 (-) True G184557
TU209364 lncRNA upstream 4438 75140270 ~ 75140504 (-) True G184558
TU209365 lncRNA upstream 4911 75140743 ~ 75141072 (-) True G184559
XM_021571790.2 mRNA downstream 541178 74533285 ~ 74594426 (-) False LOC110496093
XR_005034539.1 mRNA downstream 627499 74501414 ~ 74508105 (-) True LOC118937295
XM_021571746.2 mRNA downstream 662288 74452532 ~ 74473316 (-) True LOC110496063
XM_036955509.1 mRNA downstream 662302 74452532 ~ 74473302 (-) False LOC110496063
XM_036955510.1 mRNA downstream 662304 74452532 ~ 74473300 (-) False LOC110496063
XM_021571925.2 mRNA upstream 220739 75356571 ~ 75361242 (-) True LOC110496174
XR_005037884.1 mRNA upstream 443018 75578850 ~ 75582017 (-) True LOC110501959
XR_005037885.1 mRNA upstream 448725 75584557 ~ 75585136 (-) True LOC118936395
XM_021571935.2 mRNA upstream 459534 75595366 ~ 75605880 (-) False LOC110496186
XM_036955575.1 mRNA upstream 459534 75595366 ~ 75607735 (-) False LOC110496186
TU208774 other downstream 402967 74730872 ~ 74732637 (-) True G184006
TU208238 other downstream 1024813 74106883 ~ 74110791 (-) True G183538
TU207716 other downstream 1142059 73993078 ~ 73993545 (-) True G183096
TU207489 other downstream 1459181 73676212 ~ 73676423 (-) True G182882
TU207306 other downstream 1789757 73344950 ~ 73345847 (-) True G182708
TU210008 other upstream 470395 75606227 ~ 75606648 (-) True LOC110496186
TU211001 other upstream 741527 75877359 ~ 75878060 (-) True G186002
TU211053 other upstream 849327 75985159 ~ 75989573 (-) True tnni1c
TU211125 other upstream 957338 76093170 ~ 76099850 (-) True adm2b
TU211216 other upstream 1137692 76273524 ~ 76293392 (-) False G186197

Expression Profile