Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU299226 |
| length | 282 |
| lncRNA type | sense_over |
| GC content | 0.39 |
| exon number | 1 |
| gene id | si:ch211-136m16.8 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 45236500 ~ 45243387 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU299219 | lncRNA | downstream | 18196 | 45224072 ~ 45224612 (-) | True | G263119 |
| TU299220 | lncRNA | downstream | 20372 | 45222054 ~ 45222436 (-) | True | G263120 |
| TU299209 | lncRNA | downstream | 28584 | 45213745 ~ 45214224 (-) | True | G263109 |
| TU299212 | lncRNA | downstream | 42430 | 45200090 ~ 45200378 (-) | True | LOC118956634 |
| TU299211 | lncRNA | downstream | 42812 | 45199730 ~ 45199996 (-) | False | LOC118956634 |
| TU299227 | lncRNA | upstream | 1661 | 45244750 ~ 45248820 (-) | True | G263127 |
| TU299234 | lncRNA | upstream | 12624 | 45255713 ~ 45260199 (-) | True | G263133 |
| TU299222 | lncRNA | upstream | 51650 | 45294739 ~ 45296453 (-) | True | G263122 |
| TU299406 | lncRNA | upstream | 264157 | 45507246 ~ 45507568 (-) | True | G263293 |
| TU299384 | lncRNA | upstream | 288522 | 45531611 ~ 45570492 (-) | True | G263273 |
| LOC110520016 | mRNA | downstream | 7781 | 45228250 ~ 45235027 (-) | True | LOC110520016 |
| XM_036974223.1 | mRNA | downstream | 30125 | 45210945 ~ 45212683 (-) | True | LOC110520013 |
| XR_005046065.1 | mRNA | downstream | 42146 | 45197077 ~ 45200662 (-) | False | LOC118956634 |
| LOC110504133 | mRNA | downstream | 52688 | 45179364 ~ 45190120 (-) | True | LOC110504133 |
| XR_002472923.2 | mRNA | downstream | 138522 | 45099333 ~ 45104286 (-) | False | LOC110520012 |
| XM_021596977.2 | mRNA | upstream | 59316 | 45302405 ~ 45327280 (-) | False | LOC110520019 |
| XM_021596978.2 | mRNA | upstream | 59316 | 45302405 ~ 45327280 (-) | True | LOC110520019 |
| XM_021596981.2 | mRNA | upstream | 157196 | 45400285 ~ 45425844 (-) | False | LOC110520020 |
| XM_021596979.2 | mRNA | upstream | 157196 | 45400285 ~ 45432858 (-) | False | LOC110520020 |
| XM_021596980.2 | mRNA | upstream | 157196 | 45400285 ~ 45432858 (-) | False | LOC110520020 |
| TU299078 | other | downstream | 138545 | 45099340 ~ 45104263 (-) | True | LOC110520012 |
| TU299080 | other | downstream | 230559 | 45010172 ~ 45012249 (-) | True | G262993 |
| TU297567 | other | downstream | 1211303 | 43989524 ~ 44031505 (-) | True | G261580 |
| TU295461 | other | downstream | 2915628 | 42305328 ~ 42327180 (-) | False | G259576 |
| TU299385 | other | upstream | 293243 | 45536332 ~ 45537542 (-) | True | G263274 |
| TU302286 | other | upstream | 2356129 | 47599218 ~ 47599815 (-) | True | G265988 |
| TU302595 | other | upstream | 2788958 | 48032047 ~ 48033302 (-) | True | LOC110505248 |
| TU304852 | other | upstream | 4252388 | 49495477 ~ 49495803 (-) | True | G268310 |
| TU304858 | other | upstream | 4259327 | 49502416 ~ 49502971 (-) | True | LOC118944672 |
