RNA id: TCONS_00029389


Basic Information

Item Value
RNA id TCONS_00029389
length 650
RNA type processed_transcript
GC content 0.43
exon number 2
gene id XLOC_014894
representative True

Chromosome Information

Item Value
chromosome id NC_007130.7
NCBI id CM002903.2
chromosome length 48449771
location 31579391 ~ 31584444 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

TTTTGAGTTGTTTGTTCAGCGAGGAGCGCTTGTTATTTTCCAGACAAACGCAGATCAAAGTCCGCAACAGCCGAAAGAGTCGCTCGAAAGACATTTCACCCTTTCCTTCCAGCATTATGGGTCCACCGCGATGCAGATCCCGCCGTCTGTTACCTGAGAGAACGGAGGATTTCGGTCGGTTTGTCAGTTTATCTTGACATGGCATATACGGGTGTGTGACGACTGTAGAAAAGCTCGAAAACAAACGGGAGACCATCAAGCTAAACCTCCGTCGGGGATCGATCATCCATCCGGGGCGGGTTTTTTTGTACTGAGACCGATGTGCTTTTGTGAGACCGTTTATACAAAGACATGGATACAAGCAAGAATCAATCCTGGAAGAGACTTTGCAAAGTCAAATCTATTGGTCAGCTTTTTAGATAACTTTAAGTAAGATTTCTCTATCTAAATCCAGGGATCTGTCCCCTCACACATACACGGACGCACACACAAAATTGTCAGTATGGATTTTCAGTGTAGCAGGCATTTGTGTTTCCTGTCTTTTGTTCAGTGATACAATACAgactctcatttaaaaaaaaaaaagactaaccaGGTCGTGTTATATGAGTGGTTTCTTTTAGTTTACCCTTAGCCTTGActtgatgttt

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000151167

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00029371 lncRNA downstream 617591 30962723 ~ 30965661 (-) True XLOC_014885
TCONS_00029791 lncRNA downstream 748155 30831190 ~ 30835097 (-) True XLOC_014883
TCONS_00030294 lncRNA downstream 860748 30721012 ~ 30722504 (-) True XLOC_014880
TCONS_00030293 lncRNA downstream 959520 30592319 ~ 30623732 (-) True XLOC_014879
TCONS_00030292 lncRNA downstream 1112751 30469970 ~ 30470501 (-) True XLOC_014876
TCONS_00029413 lncRNA upstream 1040355 32624756 ~ 32632138 (-) True XLOC_014907
TCONS_00029429 lncRNA upstream 1674171 33258572 ~ 33268126 (-) False XLOC_014917
TCONS_00029432 lncRNA upstream 1686176 33270577 ~ 33274989 (-) True XLOC_014917
TCONS_00030295 lncRNA upstream 2198382 33782783 ~ 33786703 (-) True XLOC_014920
TCONS_00030296 lncRNA upstream 2603791 34188192 ~ 34230285 (-) True XLOC_014927
TCONS_00029387 mRNA downstream 6931 31568992 ~ 31576321 (-) True XLOC_014893
TCONS_00029385 mRNA downstream 60575 31437689 ~ 31522677 (-) False XLOC_014892
TCONS_00029386 mRNA downstream 60627 31437691 ~ 31522625 (-) True XLOC_014892
TCONS_00029384 mRNA downstream 180823 31392350 ~ 31402429 (-) True XLOC_014891
TCONS_00029383 mRNA downstream 210356 31347675 ~ 31372896 (-) True XLOC_014890
TCONS_00029390 mRNA upstream 9052 31593453 ~ 31686252 (-) False XLOC_014895
TCONS_00029391 mRNA upstream 9586 31593987 ~ 31707892 (-) True XLOC_014895
TCONS_00029392 mRNA upstream 158703 31743104 ~ 31765615 (-) True XLOC_014896
TCONS_00029393 mRNA upstream 213166 31797567 ~ 31802296 (-) True XLOC_014897
TCONS_00029394 mRNA upstream 294053 31878454 ~ 31900893 (-) True XLOC_014898
TCONS_00029381 other downstream 499279 31080178 ~ 31083973 (-) True XLOC_014888
TCONS_00029380 other downstream 502001 31079326 ~ 31081251 (-) False XLOC_014888
TCONS_00029373 other downstream 575835 30999833 ~ 31007417 (-) False XLOC_014886
TCONS_00029367 other downstream 783289 30752809 ~ 30799963 (-) True XLOC_014881
TCONS_00029352 other downstream 1151502 30429332 ~ 30431750 (-) False XLOC_014875
TCONS_00029399 other upstream 494550 32078951 ~ 32150111 (-) True XLOC_014900
TCONS_00029400 other upstream 746112 32330513 ~ 32330630 (-) True XLOC_014901
TCONS_00029412 other upstream 1040355 32624756 ~ 32625879 (-) False XLOC_014907
TCONS_00029414 other upstream 1065266 32649667 ~ 32649781 (-) True XLOC_014908
TCONS_00029434 other upstream 1787963 33372364 ~ 33372694 (-) True XLOC_014919