Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00030476 |
| length | 963 |
| RNA type | mRNA |
| GC content | 0.45 |
| exon number | 6 |
| gene id | XLOC_015169 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007113.7 |
| NCBI id | CM002886.2 |
| chromosome length | 59640629 |
| location | 5371492 ~ 5389696 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0005615 | extracellular space | cellular_component |
| GO:0005179 | hormone activity | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-081104-74 | Predicted to enable hormone activity. Predicted to be active in extracellular space. Orthologous to human ERFE (erythroferrone). |
| ensembl_id | ENSDART00000139762 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00030473 | lncRNA | upstream | 473202 | 4894856 ~ 4898290 (+) | True | XLOC_015166 |
| TCONS_00030459 | lncRNA | upstream | 1286071 | 4074412 ~ 4085421 (+) | False | XLOC_015160 |
| TCONS_00030452 | lncRNA | upstream | 1594146 | 3774742 ~ 3777346 (+) | False | XLOC_015156 |
| TCONS_00033461 | lncRNA | upstream | 1764091 | 3606030 ~ 3607401 (+) | True | XLOC_015155 |
| TCONS_00033229 | lncRNA | upstream | 1901479 | 3468101 ~ 3470013 (+) | True | XLOC_015149 |
| TCONS_00030488 | lncRNA | downstream | 336776 | 5726464 ~ 5729675 (+) | False | XLOC_015175 |
| TCONS_00033230 | lncRNA | downstream | 337014 | 5726702 ~ 5726906 (+) | True | XLOC_015175 |
| TCONS_00033462 | lncRNA | downstream | 341439 | 5731127 ~ 5736505 (+) | True | XLOC_015176 |
| TCONS_00033463 | lncRNA | downstream | 451420 | 5841108 ~ 5852829 (+) | False | XLOC_015178 |
| TCONS_00033464 | lncRNA | downstream | 529562 | 5919250 ~ 5923388 (+) | True | XLOC_015179 |
| TCONS_00030475 | mRNA | upstream | 60239 | 5300405 ~ 5311253 (+) | True | XLOC_015168 |
| TCONS_00030474 | mRNA | upstream | 90774 | 5245692 ~ 5280718 (+) | True | XLOC_015167 |
| TCONS_00030472 | mRNA | upstream | 962674 | 4402765 ~ 4408818 (+) | True | XLOC_015165 |
| TCONS_00030471 | mRNA | upstream | 983489 | 4383061 ~ 4388003 (+) | True | XLOC_015164 |
| TCONS_00030470 | mRNA | upstream | 1017684 | 4303181 ~ 4353808 (+) | True | XLOC_015163 |
| TCONS_00030478 | mRNA | downstream | 16548 | 5406236 ~ 5407872 (+) | True | XLOC_015170 |
| TCONS_00030479 | mRNA | downstream | 56399 | 5446087 ~ 5450198 (+) | False | XLOC_015171 |
| TCONS_00030480 | mRNA | downstream | 57194 | 5446882 ~ 5449744 (+) | True | XLOC_015171 |
| TCONS_00030481 | mRNA | downstream | 131983 | 5521671 ~ 5536927 (+) | False | XLOC_015172 |
| TCONS_00030482 | mRNA | downstream | 131984 | 5521672 ~ 5534079 (+) | True | XLOC_015172 |
| TCONS_00030468 | other | upstream | 1082946 | 4281682 ~ 4288546 (+) | True | XLOC_015162 |
| TCONS_00030445 | other | upstream | 1803533 | 3565376 ~ 3567959 (+) | True | XLOC_015153 |
| TCONS_00030434 | other | upstream | 2196497 | 3174870 ~ 3174995 (+) | True | XLOC_015144 |
| TCONS_00030432 | other | upstream | 2348837 | 2994052 ~ 3022655 (+) | True | XLOC_015141 |
| TCONS_00030431 | other | upstream | 2377334 | 2994052 ~ 2994158 (+) | False | XLOC_015141 |
| TCONS_00030484 | other | downstream | 197807 | 5587495 ~ 5677726 (+) | False | XLOC_015174 |
| TCONS_00030485 | other | downstream | 211355 | 5601043 ~ 5677644 (+) | False | XLOC_015174 |
| TCONS_00030507 | other | downstream | 866759 | 6256447 ~ 6258795 (+) | True | XLOC_015187 |
| TCONS_00030509 | other | downstream | 978014 | 6367702 ~ 6367816 (+) | True | XLOC_015189 |
| TCONS_00030520 | other | downstream | 1742593 | 7132281 ~ 7138080 (+) | False | XLOC_015199 |
| species | RNA id | representative | length | rna type | GC content | exon number | chromosome id | location |
|---|---|---|---|---|---|---|---|---|
| grasscarp (Ctenopharyngodon idella) | CI01000003_00418856_00424844.mRNA | True | 2530 | mRNA | 0.44 | 9 | CI01000003 | 418477 ~ 425969 (-) |
