Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU387602 |
| length | 257 |
| lncRNA type | inter_gene |
| GC content | 0.39 |
| exon number | 1 |
| gene id | G342533 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048568.1 |
| NCBI id | CM023222.3 |
| chromosome length | 46841314 |
| location | 31376892 ~ 31377148 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU387601 | lncRNA | upstream | 3290 | 31373398 ~ 31373602 (+) | True | G342532 |
| TU387594 | lncRNA | upstream | 16144 | 31360500 ~ 31360748 (+) | True | G342525 |
| TU387512 | lncRNA | upstream | 78852 | 31297815 ~ 31298040 (+) | True | G342448 |
| TU387126 | lncRNA | upstream | 177518 | 31198606 ~ 31199374 (+) | True | G342099 |
| TU387110 | lncRNA | upstream | 229213 | 31147393 ~ 31147679 (+) | True | G342084 |
| TU387603 | lncRNA | downstream | 46 | 31377194 ~ 31377554 (+) | True | G342534 |
| TU387604 | lncRNA | downstream | 812 | 31377960 ~ 31378206 (+) | True | G342535 |
| TU387607 | lncRNA | downstream | 3806 | 31380954 ~ 31381369 (+) | True | G342537 |
| TU387609 | lncRNA | downstream | 7816 | 31384964 ~ 31385470 (+) | True | G342539 |
| TU387610 | lncRNA | downstream | 8396 | 31385544 ~ 31385801 (+) | True | G342540 |
| XM_021600920.2 | mRNA | upstream | 149528 | 31187226 ~ 31227364 (+) | False | ppp2r5cb |
| XM_021600919.2 | mRNA | upstream | 149528 | 31187230 ~ 31227364 (+) | False | ppp2r5cb |
| XM_021600921.2 | mRNA | upstream | 149528 | 31204348 ~ 31227364 (+) | True | ppp2r5cb |
| XM_021600916.2 | mRNA | upstream | 194180 | 31175568 ~ 31182712 (+) | True | LOC110522488 |
| XM_021600917.2 | mRNA | upstream | 201795 | 31169690 ~ 31175097 (+) | False | LOC110522488 |
| XM_021600925.2 | mRNA | downstream | 15031 | 31392179 ~ 31401929 (+) | False | slc25a29 |
| XM_036976092.1 | mRNA | downstream | 15031 | 31392179 ~ 31401929 (+) | True | slc25a29 |
| XR_005051520.1 | mRNA | downstream | 32140 | 31409288 ~ 31412134 (+) | False | LOC110522495 |
| XM_021600924.2 | mRNA | downstream | 41318 | 31418466 ~ 31422057 (+) | False | LOC110522493 |
| LOC110521075 | mRNA | downstream | 45669 | 31422817 ~ 31455326 (+) | False | LOC110521075 |
| TU384729 | other | upstream | 2039953 | 29335369 ~ 29336939 (+) | True | G339928 |
| TU384628 | other | upstream | 2209896 | 29166518 ~ 29166996 (+) | True | G339830 |
| TU384441 | other | upstream | 2461353 | 28914599 ~ 28915539 (+) | True | G339693 |
| TU384407 | other | upstream | 2517737 | 28858716 ~ 28859155 (+) | True | G339660 |
| TU381324 | other | upstream | 3775336 | 27590852 ~ 27601556 (+) | True | LOC118964415 |
| TU387608 | other | downstream | 4678 | 31381826 ~ 31382749 (+) | True | G342538 |
| TU387623 | other | downstream | 40807 | 31417955 ~ 31419256 (+) | False | LOC110522493 |
| TU387645 | other | downstream | 73985 | 31451133 ~ 31451476 (+) | True | G342571 |
| TU387844 | other | downstream | 408717 | 31785865 ~ 31786206 (+) | True | G342707 |
| TU389208 | other | downstream | 1317838 | 32694986 ~ 32704371 (+) | True | G343958 |
