RNA id: XM_021603677.2


Basic Information

Item Value
RNA id XM_021603677.2
length 711
RNA type mRNA
GC content 0.42
exon number 4
gene id ndufa11
representative True

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 60678698 ~ 60682883 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

ACAGCGTTACAGACCATTTAGAAATAGGTTGTCAATGTGAGATGGTGTTTTATTTATTATGTAGCTAATAAAACATGTACAAATAATTGTATATTAAACGTATAAAATCAAATTTGTCAACAAAGTACTATTTATAgaatgtttgtttggttttaaTAAAGTTTTACAATATCAATTCTCGTCTTCATATTTTTTTTCATCTCGCGATGTCTCCTTGTCCTTCATGTGAAATCCAAAATGGGTTATTGGGATCTGCAAGAAGGTAAGGATTGTGTCGAGAAAACATGGATCACCACCAAATTAGGCACAGCTCTAGGGTTGGTGGGTTCAGCCTATCACATTGTGGCATTCCAGCCTGATTCTGCAATCCAAGCTGTTCAGAGAGCCACAAATGGCACAGTAACCATGGCTGCCTTGGGGGCCATTTTTGGAATGACCACTTGTCTAGCTGCACAGGCCCGGGATGCTCCTGATGACCCTGTGAACTACTTCATCGGAGGCTGTGCATCAGGAGTCTTTCTTGGAGCTCGTACTCACAGTGCAATGACAGGCACGACGGCATGTATTGGGCTGGGGACACTGGCCATGTTCACCAAGGTGGGCAAGATGGAGGGCTGGAGATTAGCGGGACCACCGAGGATGTAAACAGCCTGAGACTATATATCAACATGTATATTGTATATTACTTGAATAAACTTGTGTAAAAGAGTA

Function

GO:

id name namespace
GO:0016021 integral component of membrane cellular_component

KEGG:

id description
K03956 NDUFA11; NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 11

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU479563 lncRNA downstream 26636 60651372 ~ 60652062 (-) True G423246
TU479546 lncRNA downstream 51103 60627389 ~ 60627595 (-) True G423230
TU479518 lncRNA downstream 82416 60596015 ~ 60596282 (-) True G423205
TU479515 lncRNA downstream 84501 60593903 ~ 60594197 (-) True G423202
TU479513 lncRNA downstream 85873 60592615 ~ 60592825 (-) True G423200
TU479573 lncRNA upstream 13118 60696001 ~ 60698223 (-) True cers4a
TU479569 lncRNA upstream 17166 60700049 ~ 60704571 (-) True G423251
TU479615 lncRNA upstream 61389 60744272 ~ 60744501 (-) True G423291
TU479652 lncRNA upstream 126754 60809637 ~ 60809875 (-) True G423326
TU479654 lncRNA upstream 129314 60812197 ~ 60812455 (-) True G423328
XM_021603676.2 mRNA downstream 52223 60605208 ~ 60626475 (-) True LOC110524222
XM_021603670.2 mRNA downstream 165218 60509679 ~ 60513480 (-) False LOC110524219
XM_021603672.2 mRNA downstream 165463 60509679 ~ 60513235 (-) False LOC110524219
XM_021603668.2 mRNA downstream 202250 60471312 ~ 60476448 (-) False LOC110524218
XM_021603680.2 mRNA upstream 13020 60695903 ~ 60728972 (-) False cers4a
XM_021603681.2 mRNA upstream 13020 60695903 ~ 60728972 (-) False cers4a
XM_021603682.2 mRNA upstream 13020 60695903 ~ 60728972 (-) False cers4a
LOC110524228 mRNA upstream 178564 60861447 ~ 60884008 (-) False LOC110524228
XM_036978005.1 mRNA upstream 219515 60902398 ~ 60913736 (-) False timm44
TU478587 other downstream 577642 60100765 ~ 60101056 (-) True G422347
TU477230 other downstream 1540441 59132870 ~ 59138257 (-) True lsg1
TU477090 other downstream 1642399 59026103 ~ 59036299 (-) True G420982
TU476443 other downstream 2264555 58413128 ~ 58414143 (-) True G420421
TU476193 other downstream 2564638 58112387 ~ 58114060 (-) True G420193
TU479791 other upstream 376111 61058994 ~ 61071143 (-) True LOC110524239
TU480894 other upstream 933987 61616870 ~ 61617244 (-) True G424474
TU480919 other upstream 967084 61649967 ~ 61651775 (-) True G424499
TU480929 other upstream 976150 61659033 ~ 61659585 (-) True G424502
TU481096 other upstream 1205315 61888198 ~ 61927422 (-) False G424649

Expression Profile