Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00033353 |
| length | 1760 |
| lncRNA type | inter_gene |
| GC content | 0.33 |
| exon number | 2 |
| gene id | XLOC_016228 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_007113.7 |
| NCBI id | CM002886.2 |
| chromosome length | 59640629 |
| location | 13875695 ~ 13877521 (-) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0009798 | axis specification | biological_process |
| GO:0051674 | localization of cell | biological_process |
| GO:0001756 | somitogenesis | biological_process |
| GO:0043009 | chordate embryonic development | biological_process |
| GO:0048513 | animal organ development | biological_process |
| GO:0035282 | segmentation | biological_process |
| GO:0031290 | retinal ganglion cell axon guidance | biological_process |
| GO:0016477 | cell migration | biological_process |
| GO:0009887 | animal organ morphogenesis | biological_process |
| GO:0009888 | tissue development | biological_process |
| GO:0060429 | epithelium development | biological_process |
| GO:0048562 | embryonic organ morphogenesis | biological_process |
| GO:0048568 | embryonic organ development | biological_process |
| GO:0009653 | anatomical structure morphogenesis | biological_process |
| GO:0021906 | hindbrain-spinal cord boundary formation | biological_process |
| GO:0048856 | anatomical structure development | biological_process |
| GO:0030522 | intracellular receptor signaling pathway | biological_process |
| GO:0021915 | neural tube development | biological_process |
| GO:0048598 | embryonic morphogenesis | biological_process |
| GO:0048870 | cell motility | biological_process |
| GO:0009948 | anterior/posterior axis specification | biological_process |
| GO:0009952 | anterior/posterior pattern specification | biological_process |
| GO:0060485 | mesenchyme development | biological_process |
| GO:0007632 | visual behavior | biological_process |
| GO:0007634 | optokinetic behavior | biological_process |
| GO:0048340 | paraxial mesoderm morphogenesis | biological_process |
| GO:0048341 | paraxial mesoderm formation | biological_process |
| GO:0048646 | anatomical structure formation involved in morphogenesis | biological_process |
| GO:0003002 | regionalization | biological_process |
| GO:0000578 | embryonic axis specification | biological_process |
| GO:0007389 | pattern specification process | biological_process |
| GO:0061053 | somite development | biological_process |
| GO:0007399 | nervous system development | biological_process |
| GO:0032502 | developmental process | biological_process |
| GO:0007417 | central nervous system development | biological_process |
| GO:0007420 | brain development | biological_process |
| GO:0048384 | retinoic acid receptor signaling pathway | biological_process |
| GO:0060322 | head development | biological_process |
| GO:0009790 | embryo development | biological_process |
| GO:0009792 | embryo development ending in birth or egg hatching | biological_process |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00032006 | lncRNA | downstream | 89037 | 13783393 ~ 13786658 (-) | False | XLOC_016227 |
| TCONS_00032008 | lncRNA | downstream | 89086 | 13784341 ~ 13786609 (-) | False | XLOC_016227 |
| TCONS_00033788 | lncRNA | downstream | 89095 | 13783393 ~ 13786600 (-) | False | XLOC_016227 |
| TCONS_00032009 | lncRNA | downstream | 89095 | 13784395 ~ 13786600 (-) | False | XLOC_016227 |
| TCONS_00033787 | lncRNA | downstream | 89106 | 13783393 ~ 13786589 (-) | False | XLOC_016227 |
| TCONS_00033789 | lncRNA | upstream | 124874 | 14002395 ~ 14004942 (-) | True | XLOC_016230 |
| TCONS_00032013 | lncRNA | upstream | 130417 | 14007938 ~ 14009528 (-) | True | XLOC_016231 |
| TCONS_00032014 | lncRNA | upstream | 132109 | 14009630 ~ 14010658 (-) | True | XLOC_016232 |
| TCONS_00032015 | lncRNA | upstream | 144435 | 14021956 ~ 14029161 (-) | True | XLOC_016233 |
| TCONS_00032018 | lncRNA | upstream | 394195 | 14271716 ~ 14272075 (-) | True | XLOC_016234 |
| TCONS_00032004 | mRNA | downstream | 183861 | 13688624 ~ 13691834 (-) | True | XLOC_016226 |
| TCONS_00032003 | mRNA | downstream | 492969 | 13376099 ~ 13382726 (-) | True | XLOC_016223 |
| TCONS_00032001 | mRNA | downstream | 541704 | 13257124 ~ 13333991 (-) | False | XLOC_016222 |
| TCONS_00032002 | mRNA | downstream | 541763 | 13298051 ~ 13333932 (-) | True | XLOC_016222 |
| TCONS_00032000 | mRNA | downstream | 607131 | 13255986 ~ 13268564 (-) | False | XLOC_016222 |
| TCONS_00032012 | mRNA | upstream | 7634 | 13885155 ~ 13886842 (-) | True | XLOC_016229 |
| TCONS_00032016 | mRNA | upstream | 330038 | 14207559 ~ 14271874 (-) | False | XLOC_016234 |
| TCONS_00032017 | mRNA | upstream | 330637 | 14208158 ~ 14272083 (-) | False | XLOC_016234 |
| TCONS_00032019 | mRNA | upstream | 399118 | 14276639 ~ 14390627 (-) | False | XLOC_016235 |
| TCONS_00032020 | mRNA | upstream | 401320 | 14278841 ~ 14387335 (-) | False | XLOC_016235 |
| TCONS_00031998 | other | downstream | 620898 | 13252152 ~ 13254797 (-) | True | XLOC_016221 |
| TCONS_00031991 | other | downstream | 1651156 | 12224423 ~ 12224539 (-) | True | XLOC_016216 |
| TCONS_00031983 | other | downstream | 2212772 | 11656553 ~ 11662923 (-) | True | XLOC_016210 |
| TCONS_00031958 | other | downstream | 2970516 | 10905062 ~ 10905179 (-) | True | XLOC_016199 |
| TCONS_00031915 | other | downstream | 4128264 | 9747302 ~ 9747431 (-) | True | XLOC_016178 |
| TCONS_00032033 | other | upstream | 1116872 | 14994393 ~ 14994490 (-) | True | XLOC_016250 |
| TCONS_00032037 | other | upstream | 1151125 | 15028646 ~ 15033121 (-) | True | XLOC_016251 |
| TCONS_00032040 | other | upstream | 1224582 | 15102103 ~ 15107716 (-) | True | XLOC_016253 |
| TCONS_00032063 | other | upstream | 2631303 | 16508824 ~ 16512422 (-) | True | XLOC_016264 |
| TCONS_00032069 | other | upstream | 2738419 | 16615940 ~ 16616055 (-) | True | XLOC_016267 |
