RNA id: TU754674


Basic Information

Item Value
RNA id TU754674
length 376
lncRNA type intronic
GC content 0.52
exon number 2
gene id G663050
representative True

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 97908 ~ 98310 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

cacacgctaacacaccccccccactacacacactaacacacccgacacacactaacacacacacactaacacaccctacacacactaacacacacccccacacacactaacacaccctacacacactattacacacccccactacacactaacacaccctacacacactaacacacccgacacacactaacacacacccccacacacactaacacaccctacgcacactaacacaccctacacacactaacacacacccccacacacactaacacaccctacacacactattacacacccccctacacacatactaacacacccccccacaaacatactaacacacccccccacacacatactaacacaccccccc

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU754663 lncRNA downstream 23408 73784 ~ 74500 (-) True G663041
TU754660 lncRNA downstream 46524 51126 ~ 51384 (-) True G663038
TU754502 lncRNA downstream 53664 44044 ~ 44244 (-) True G662929
TU754498 lncRNA downstream 58487 38957 ~ 39421 (-) True G662925
TU754482 lncRNA downstream 59593 29411 ~ 38315 (-) True G662920
TU754688 lncRNA upstream 59725 158035 ~ 158447 (-) True G663063
TU754694 lncRNA upstream 81927 180237 ~ 180567 (-) True G663068
TU754655 lncRNA upstream 105818 204128 ~ 251054 (-) True hmgn3
TU754712 lncRNA upstream 136153 234463 ~ 235633 (-) True G663085
TU754730 lncRNA upstream 153888 252198 ~ 253555 (-) False G663098
XM_021569967.2 mRNA upstream 105800 204110 ~ 251091 (-) False hmgn3
XM_021569969.2 mRNA upstream 105800 204110 ~ 251091 (-) False hmgn3
XM_021569966.2 mRNA upstream 105800 204110 ~ 251092 (-) False hmgn3
XM_021569968.2 mRNA upstream 105800 204110 ~ 251092 (-) False hmgn3
XM_036986809.1 mRNA upstream 172365 270675 ~ 272012 (-) True LOC118965589
TU754652 other upstream 105818 204128 ~ 251054 (-) False hmgn3
TU754653 other upstream 105818 204128 ~ 251054 (-) False hmgn3
TU754654 other upstream 105818 204128 ~ 251054 (-) False hmgn3
TU754858 other upstream 283012 381322 ~ 386982 (-) False G663215
TU754888 other upstream 329881 428191 ~ 430258 (-) True G663235

Expression Profile