Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1325609 |
| length | 327 |
| lncRNA type | sense_over |
| GC content | 0.39 |
| exon number | 2 |
| gene id | G1162388 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 29517708 ~ 29545477 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1325586 | lncRNA | upstream | 21869 | 29495252 ~ 29495839 (+) | True | G1162365 |
| TU1325582 | lncRNA | upstream | 24582 | 29492592 ~ 29493126 (+) | True | G1162361 |
| TU1325133 | lncRNA | upstream | 32101 | 29484799 ~ 29485607 (+) | True | LOC110486071 |
| TU1325130 | lncRNA | upstream | 78790 | 29437799 ~ 29438918 (+) | True | G1161961 |
| TU1325120 | lncRNA | upstream | 81263 | 29426276 ~ 29436445 (+) | True | LOC110486070 |
| TU1325718 | lncRNA | downstream | 141065 | 29686542 ~ 29687002 (+) | False | G1162471 |
| TU1325719 | lncRNA | downstream | 141065 | 29686542 ~ 29687002 (+) | True | G1162471 |
| TU1325726 | lncRNA | downstream | 153570 | 29699047 ~ 29699261 (+) | True | G1162478 |
| TU1325695 | lncRNA | downstream | 162460 | 29707937 ~ 29708562 (+) | True | G1162449 |
| TU1325693 | lncRNA | downstream | 168058 | 29713535 ~ 29719133 (+) | True | G1162447 |
| XM_021557394.2 | mRNA | upstream | 31895 | 29444123 ~ 29485813 (+) | False | LOC110486071 |
| XM_021557393.2 | mRNA | upstream | 89142 | 29419363 ~ 29428566 (+) | False | LOC110486070 |
| XM_036940723.1 | mRNA | upstream | 108235 | 29377409 ~ 29409473 (+) | False | LOC110486069 |
| XM_021557413.2 | mRNA | downstream | 110079 | 29655556 ~ 29706148 (+) | False | LOC110486077 |
| XM_036940727.1 | mRNA | downstream | 110083 | 29655560 ~ 29686494 (+) | True | LOC110486077 |
| XM_021556141.2 | mRNA | downstream | 296528 | 29842005 ~ 29894155 (+) | False | ncx |
| XM_036939698.1 | mRNA | downstream | 296528 | 29842005 ~ 29894155 (+) | False | ncx |
| NM_001124598.1 | mRNA | downstream | 296642 | 29842119 ~ 29891799 (+) | True | ncx |
| TU1325585 | other | upstream | 22806 | 29494362 ~ 29494902 (+) | True | G1162364 |
| TU1325047 | other | upstream | 146761 | 29364052 ~ 29370947 (+) | True | si:ch211-126j24.1 |
| TU1325076 | other | upstream | 218052 | 29298758 ~ 29299656 (+) | True | G1161908 |
| TU1322806 | other | upstream | 698260 | 28818734 ~ 28819448 (+) | True | G1159924 |
| TU1322370 | other | upstream | 1018502 | 28472676 ~ 28499206 (+) | True | LOC110487355 |
| TU1326020 | other | downstream | 285277 | 29830754 ~ 29831296 (+) | True | G1162753 |
| TU1327390 | other | downstream | 1568834 | 31114311 ~ 31119677 (+) | True | LOC110486104 |
| TU1328699 | other | downstream | 2456274 | 32001751 ~ 32110733 (+) | False | LOC110486134 |
| TU1329495 | other | downstream | 3169779 | 32715256 ~ 32722462 (+) | True | ifn2 |
| TU1329888 | other | downstream | 3683636 | 33229113 ~ 33230483 (+) | True | LOC110486146 |
