Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1330348 |
| length | 230 |
| lncRNA type | intronic |
| GC content | 0.40 |
| exon number | 1 |
| gene id | G1166584 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 33371155 ~ 33371384 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1330339 | lncRNA | upstream | 1197 | 33369236 ~ 33369958 (+) | True | G1166575 |
| TU1330346 | lncRNA | upstream | 3250 | 33367644 ~ 33367905 (+) | True | G1166582 |
| TU1330333 | lncRNA | upstream | 4988 | 33348820 ~ 33366167 (+) | False | G1166573 |
| TU1330334 | lncRNA | upstream | 12977 | 33348820 ~ 33358178 (+) | False | G1166573 |
| TU1330332 | lncRNA | upstream | 12977 | 33357345 ~ 33358178 (+) | True | G1166573 |
| TU1330361 | lncRNA | downstream | 49916 | 33421300 ~ 33459483 (+) | True | G1166591 |
| TU1330354 | lncRNA | downstream | 52588 | 33423972 ~ 33427003 (+) | False | G1166590 |
| TU1330357 | lncRNA | downstream | 55901 | 33427285 ~ 33432342 (+) | True | G1166590 |
| TU1330463 | lncRNA | downstream | 171729 | 33543113 ~ 33545530 (+) | True | G1166690 |
| TU1330509 | lncRNA | downstream | 235970 | 33607354 ~ 33607579 (+) | True | G1166735 |
| XM_036939716.1 | mRNA | upstream | 31428 | 33336015 ~ 33339727 (+) | True | csf-3 |
| NM_001195184.1 | mRNA | upstream | 31433 | 33335447 ~ 33339722 (+) | False | csf-3 |
| XM_021556174.2 | mRNA | upstream | 31433 | 33335690 ~ 33339722 (+) | False | csf-3 |
| XM_021557539.2 | mRNA | upstream | 44121 | 33320635 ~ 33327034 (+) | False | LOC110486150 |
| XM_021557554.2 | mRNA | downstream | 266425 | 33637809 ~ 33653835 (+) | False | LOC110486158 |
| XM_036940808.1 | mRNA | downstream | 266425 | 33637809 ~ 33653835 (+) | False | LOC110486158 |
| XM_036940809.1 | mRNA | downstream | 266663 | 33638047 ~ 33653835 (+) | True | LOC110486158 |
| XM_021557562.2 | mRNA | downstream | 399055 | 33770439 ~ 33783009 (+) | False | LOC110486161 |
| XM_021557563.2 | mRNA | downstream | 399055 | 33770439 ~ 33783009 (+) | True | LOC110486161 |
| TU1330025 | other | upstream | 121947 | 33239953 ~ 33249208 (+) | False | G1166318 |
| TU1329888 | other | upstream | 140672 | 33229113 ~ 33230483 (+) | True | LOC110486146 |
| TU1329495 | other | upstream | 648693 | 32715256 ~ 32722462 (+) | True | ifn2 |
| TU1328699 | other | upstream | 1260422 | 32001751 ~ 32110733 (+) | False | LOC110486134 |
| TU1327390 | other | upstream | 2251478 | 31114311 ~ 31119677 (+) | True | LOC110486104 |
| TU1330567 | other | downstream | 419256 | 33790640 ~ 33803665 (+) | True | G1166779 |
| TU1331612 | other | downstream | 1309804 | 34681188 ~ 34687650 (+) | True | LOC110486188 |
| TU1333280 | other | downstream | 2618472 | 35989856 ~ 35992600 (+) | True | G1169121 |
| TU1333368 | other | downstream | 2796244 | 36167628 ~ 36168331 (+) | True | G1169207 |
| TU1333369 | other | downstream | 2798512 | 36169896 ~ 36171571 (+) | True | G1169208 |
