RNA id: TCONS_00044407


Basic Information

Item Value
RNA id TCONS_00044407
length 776
RNA type mRNA
GC content 0.50
exon number 5
gene id XLOC_022516
representative True

Chromosome Information

Item Value
chromosome id NC_007134.7
NCBI id CM002907.2
chromosome length 46223584
location 35027177 ~ 35082494 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

TGCGTTTCCTGTCGAGGAAGTTAAACATTTCGAATAGTGATTAAAGGCGCTGAAGCGCTTAGAGTGATTTATAGCTTTATCGATAGTGAAGTTTCATATAATGTGATGaatgtaaacacaaaagaaggGCTAATTTGAGACGACGGAACGGACCGGAGACTCCACCATGCCAGGAGATGAAGTTCGGCAGAGGAAAGGAGGTGGTCGCAAGAAGTCCAAAAAGGGAAAAGGAAAGGGTGGTTTGGATCGGACTGGCAGCCTAGATGGGCAAAATGATCTGCTGTTACCCCCTACCATTATACCATCCAAAAAACCTGTGGAGGAGAAGACAAAAACAGCCCAGGCTAAGATCGAAGAGGAGTCTGCCTTTTCTATCTGCCTCCAGGTGCTCTTCCCATATCTGCTGGCCGGGATGGGGATGGTGATGGCAGGCATGGTGCTGGACAGCGTGCAGCATTGGGAAGTGTTTAAGGTGATCACCGAGGTCTTCATCTTGGTACCTGCTCTGGTCGGCCTGAAAGGAAACCTAGAGATGACTCTGGCATCTCGTCTGTCTACTGCTGCTAACACTGGACAGATGGACGACCCCAAACAGCAGTGGCTGATGGTGACCTGTAACCTTGCACTCATTCAGGTTCAGGCCACTGTGGTGGGTTTTCTGGCGGCTCTGGCAGCTGTAGGTCTTGGTTCCCTGTCCAGAGGAGGTGTAGAGCTGGACCAGGCTGCAGTCTTGTGTGCTAGCAGTGTTACTACTGCATTTGTGGCCGCTCTGTCTT

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000168731

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00044744 lncRNA downstream 283008 34767321 ~ 34768151 (-) True XLOC_022515
TCONS_00044397 lncRNA downstream 1286884 33761148 ~ 33764275 (-) False XLOC_022511
TCONS_00044394 lncRNA downstream 1300839 33747413 ~ 33750320 (-) True XLOC_022510
TCONS_00044385 lncRNA downstream 1312048 33731189 ~ 33739111 (-) False XLOC_022509
TCONS_00045063 lncRNA upstream 133876 35200692 ~ 35203084 (-) True XLOC_022518
TCONS_00044416 lncRNA upstream 326291 35393107 ~ 35396760 (-) True XLOC_022520
TCONS_00045064 lncRNA upstream 473544 35540360 ~ 35549662 (-) False XLOC_022523
TCONS_00045065 lncRNA upstream 597036 35663852 ~ 35665582 (-) False XLOC_022525
TCONS_00045066 lncRNA upstream 597036 35663852 ~ 35669221 (-) True XLOC_022525
TCONS_00044401 mRNA downstream 1064397 33977724 ~ 33986762 (-) False XLOC_022514
TCONS_00044399 mRNA downstream 1106562 33934877 ~ 33944597 (-) True XLOC_022512
TCONS_00044395 mRNA downstream 1275850 33757173 ~ 33775309 (-) False XLOC_022511
TCONS_00044408 mRNA upstream 120867 35187683 ~ 35195908 (-) True XLOC_022517
TCONS_00044410 mRNA upstream 177562 35244378 ~ 35347738 (-) False XLOC_022519
TCONS_00044411 mRNA upstream 193062 35259878 ~ 35347714 (-) True XLOC_022519
TCONS_00044413 mRNA upstream 294908 35361724 ~ 35396978 (-) False XLOC_022520
TCONS_00044412 mRNA upstream 294908 35361724 ~ 35396978 (-) False XLOC_022520
TCONS_00044402 other downstream 1064794 33978425 ~ 33986365 (-) True XLOC_022514
TCONS_00044400 other downstream 1082171 33968866 ~ 33968988 (-) True XLOC_022513
TCONS_00044391 other downstream 1306388 33739477 ~ 33744771 (-) False XLOC_022510
TCONS_00044369 other downstream 1749740 33301304 ~ 33301419 (-) True XLOC_022500
TCONS_00044368 other downstream 1832031 33219005 ~ 33219128 (-) True XLOC_022498
TCONS_00044409 other upstream 177562 35244378 ~ 35256445 (-) False XLOC_022519
TCONS_00044432 other upstream 797910 35864726 ~ 35864853 (-) True XLOC_022530
TCONS_00044435 other upstream 931731 35998547 ~ 35999332 (-) True XLOC_022531
TCONS_00044457 other upstream 1255194 36322010 ~ 36322124 (-) True XLOC_022538
TCONS_00044460 other upstream 1346882 36413698 ~ 36418022 (-) False XLOC_022539

Expression Profile

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