Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1542006 |
| length | 289 |
| lncRNA type | antisense_over |
| GC content | 0.45 |
| exon number | 1 |
| gene id | G1348870 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 18522906 ~ 18523194 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1542005 | lncRNA | upstream | 96 | 18522508 ~ 18522810 (+) | True | G1348869 |
| TU1542001 | lncRNA | upstream | 3850 | 18518845 ~ 18519056 (+) | True | G1348865 |
| TU1541561 | lncRNA | upstream | 149945 | 18372633 ~ 18372961 (+) | True | G1348468 |
| TU1541559 | lncRNA | upstream | 155119 | 18367583 ~ 18367787 (+) | True | G1348466 |
| TU1541554 | lncRNA | upstream | 173420 | 18349204 ~ 18349486 (+) | True | G1348461 |
| TU1542008 | lncRNA | downstream | 374 | 18523568 ~ 18524035 (+) | True | G1348872 |
| TU1542011 | lncRNA | downstream | 2458 | 18525652 ~ 18526637 (+) | True | G1348875 |
| TU1542012 | lncRNA | downstream | 3671 | 18526865 ~ 18527401 (+) | True | G1348876 |
| TU1542013 | lncRNA | downstream | 4665 | 18527859 ~ 18528062 (+) | True | G1348877 |
| TU1542014 | lncRNA | downstream | 4948 | 18528142 ~ 18528361 (+) | True | G1348878 |
| XM_021564993.2 | mRNA | upstream | 45579 | 18455276 ~ 18477327 (+) | False | LOC110491501 |
| XM_021564989.2 | mRNA | upstream | 45579 | 18457602 ~ 18477327 (+) | False | LOC110491501 |
| XM_021564990.2 | mRNA | upstream | 45579 | 18457613 ~ 18477327 (+) | False | LOC110491501 |
| XM_021564992.2 | mRNA | upstream | 45579 | 18457613 ~ 18477327 (+) | True | LOC110491501 |
| XM_021564987.2 | mRNA | upstream | 75176 | 18440336 ~ 18447730 (+) | True | nfe2l1b |
| XM_021565013.2 | mRNA | downstream | 63872 | 18587066 ~ 18595625 (+) | True | calcoco2 |
| XR_005036458.1 | mRNA | downstream | 79078 | 18602272 ~ 18606647 (+) | True | LOC118939515 |
| XM_036946384.1 | mRNA | downstream | 90462 | 18613656 ~ 18621851 (+) | False | msl1b |
| XM_036946385.1 | mRNA | downstream | 91133 | 18614327 ~ 18621851 (+) | False | msl1b |
| XM_021565017.2 | mRNA | downstream | 91201 | 18614395 ~ 18621851 (+) | False | msl1b |
| TU1540858 | other | upstream | 919435 | 17596719 ~ 17603471 (+) | True | LOC110491483 |
| TU1540371 | other | upstream | 1248926 | 17236283 ~ 17273980 (+) | False | LOC110492842 |
| TU1539740 | other | upstream | 1366236 | 17155454 ~ 17156670 (+) | True | LOC110491464 |
| TU1539652 | other | upstream | 1576662 | 16945928 ~ 16946244 (+) | True | G1346758 |
| TU1538191 | other | upstream | 2979369 | 15542391 ~ 15543537 (+) | True | G1345431 |
| TU1542039 | other | downstream | 31983 | 18555177 ~ 18555452 (+) | True | G1348897 |
| TU1542100 | other | downstream | 229429 | 18752623 ~ 18760420 (+) | False | LOC110491516 |
| TU1542335 | other | downstream | 615833 | 19139027 ~ 19141677 (+) | True | LOC110491534 |
| TU1543395 | other | downstream | 1213968 | 19737162 ~ 19738034 (+) | True | G1350066 |
| TU1543613 | other | downstream | 1507536 | 20030730 ~ 20037978 (+) | True | G1350275 |
