Gene
RNA
| Item | Value |
|---|---|
| RNA id | NM_001165157.1 |
| length | 716 |
| RNA type | mRNA |
| GC content | 0.49 |
| exon number | 4 |
| gene id | pfn1 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 63307806 ~ 63317521 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0030036 | actin cytoskeleton organization | biological_process |
| GO:0003779 | actin binding | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU2016775 | lncRNA | upstream | 59859 | 63246002 ~ 63247947 (+) | False | G1760816 |
| TU2016776 | lncRNA | upstream | 60755 | 63246002 ~ 63247051 (+) | True | G1760816 |
| TU2016766 | lncRNA | upstream | 72067 | 63232777 ~ 63235739 (+) | True | LOC118942976 |
| TU2016760 | lncRNA | upstream | 77775 | 63228975 ~ 63230031 (+) | True | G1760807 |
| TU2016738 | lncRNA | upstream | 97368 | 63206872 ~ 63210438 (+) | True | G1760797 |
| TU2016807 | lncRNA | downstream | 6336 | 63323857 ~ 63325105 (+) | True | G1760841 |
| TU2016816 | lncRNA | downstream | 22375 | 63339896 ~ 63340302 (+) | True | G1760848 |
| TU2016829 | lncRNA | downstream | 26514 | 63344035 ~ 63344598 (+) | False | G1760851 |
| TU2016830 | lncRNA | downstream | 26514 | 63344035 ~ 63348007 (+) | True | G1760851 |
| TU2016831 | lncRNA | downstream | 29745 | 63347266 ~ 63355530 (+) | True | G1760852 |
| XR_005038700.1 | mRNA | upstream | 69499 | 63235628 ~ 63238307 (+) | False | LOC118942976 |
| XM_036958398.1 | mRNA | upstream | 84707 | 63162215 ~ 63223099 (+) | True | LOC110500912 |
| XM_036956533.1 | mRNA | upstream | 216138 | 63071618 ~ 63091668 (+) | True | LOC110500812 |
| XM_036958393.1 | mRNA | upstream | 257123 | 62991130 ~ 63050683 (+) | False | LOC110500813 |
| XM_036958392.1 | mRNA | upstream | 257123 | 62991132 ~ 63050683 (+) | False | LOC110500813 |
| XM_036958401.1 | mRNA | downstream | 11990 | 63329511 ~ 63343614 (+) | False | LOC110500814 |
| XM_036958402.1 | mRNA | downstream | 12008 | 63329529 ~ 63343614 (+) | False | LOC110500814 |
| XM_036958404.1 | mRNA | downstream | 12474 | 63329995 ~ 63338837 (+) | False | LOC110500814 |
| XM_036958400.1 | mRNA | downstream | 12474 | 63329995 ~ 63343614 (+) | False | LOC110500814 |
| XM_036958403.1 | mRNA | downstream | 12474 | 63329995 ~ 63343614 (+) | True | LOC110500814 |
| TU2016744 | other | upstream | 92053 | 63210133 ~ 63215753 (+) | True | G1760800 |
| TU2016623 | other | upstream | 279366 | 63010285 ~ 63028440 (+) | True | LOC110500813 |
| TU2016622 | other | upstream | 307210 | 62991170 ~ 63000596 (+) | False | LOC110500813 |
| TU2016581 | other | upstream | 418768 | 62873681 ~ 62889038 (+) | True | LOC110500953 |
| TU2016469 | other | upstream | 493565 | 62811775 ~ 62814241 (+) | True | G1760587 |
| TU2016837 | other | downstream | 50185 | 63367706 ~ 63372171 (+) | True | si:ch73-265d7.2 |
| TU2016847 | other | downstream | 79714 | 63397235 ~ 63418259 (+) | False | G1760865 |
| TU2016942 | other | downstream | 232384 | 63549905 ~ 63551492 (+) | True | G1760941 |
| TU2016932 | other | downstream | 515076 | 63832597 ~ 63837856 (+) | False | ctc1 |
| TU2016928 | other | downstream | 524090 | 63841611 ~ 63849334 (+) | True | ctc1 |
