RNA id: TCONS_00004859


Basic Information

Item Value
RNA id TCONS_00004859
length 115
RNA type rRNA
GC content 0.60
exon number 1
gene id XLOC_002611
representative True

Chromosome Information

Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 9141565 ~ 9141679 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

gccggcagctagctctctgcaactctcacatggtcacccactgaagctaagcagggctgcgtccGGTCAGTACccggatgagagaccacatgggaaagctagggtGCAGCCGGAA

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000182325

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00006000 lncRNA downstream 282997 8841698 ~ 8858568 (-) True XLOC_002606
TCONS_00005999 lncRNA downstream 283016 8841698 ~ 8858549 (-) False XLOC_002606
TCONS_00005998 lncRNA downstream 483888 8638921 ~ 8657677 (-) True XLOC_002603
TCONS_00005997 lncRNA downstream 520022 8618718 ~ 8621543 (-) False XLOC_002602
TCONS_00006001 lncRNA upstream 3829 9145508 ~ 9146642 (-) True XLOC_002612
TCONS_00006002 lncRNA upstream 48418 9190097 ~ 9191755 (-) True XLOC_002613
TCONS_00004863 lncRNA upstream 122994 9264673 ~ 9269249 (-) False XLOC_002614
TCONS_00004864 lncRNA upstream 122994 9264673 ~ 9269711 (-) True XLOC_002614
TCONS_00005750 lncRNA upstream 124374 9266053 ~ 9267711 (-) True XLOC_002615
TCONS_00004858 mRNA downstream 26182 9105007 ~ 9115383 (-) True XLOC_002610
TCONS_00004854 mRNA downstream 52020 9006574 ~ 9089545 (-) False XLOC_002608
TCONS_00004857 mRNA downstream 54849 9037371 ~ 9086716 (-) True XLOC_002608
TCONS_00004850 mRNA downstream 184085 8947228 ~ 8957480 (-) False XLOC_002607
TCONS_00004853 mRNA downstream 184592 8955287 ~ 8956973 (-) True XLOC_002607
TCONS_00004860 mRNA upstream 44972 9186651 ~ 9190831 (-) False XLOC_002613
TCONS_00004861 mRNA upstream 48386 9190065 ~ 9192450 (-) False XLOC_002613
TCONS_00004862 mRNA upstream 105914 9247593 ~ 9269733 (-) False XLOC_002614
TCONS_00004865 mRNA upstream 163371 9305050 ~ 9346360 (-) True XLOC_002616
TCONS_00004866 mRNA upstream 255626 9397305 ~ 9410068 (-) True XLOC_002617
TCONS_00004856 other downstream 51929 9037358 ~ 9089636 (-) False XLOC_002608
TCONS_00004855 other downstream 124728 9016721 ~ 9016837 (-) True XLOC_002609
TCONS_00004848 other downstream 463737 8675890 ~ 8677828 (-) True XLOC_002605
TCONS_00004819 other downstream 1181727 7929771 ~ 7959838 (-) True XLOC_002588
TCONS_00004811 other downstream 1248881 7870627 ~ 7892684 (-) False XLOC_002585
TCONS_00004869 other upstream 393103 9534782 ~ 9538326 (-) False XLOC_002618
TCONS_00004879 other upstream 1177629 10319308 ~ 10332427 (-) False XLOC_002623
TCONS_00004880 other upstream 1187785 10329464 ~ 10329554 (-) True XLOC_002623
TCONS_00004903 other upstream 2619701 11761380 ~ 11764439 (-) True XLOC_002636
TCONS_00004913 other upstream 4163386 13305065 ~ 13305183 (-) True XLOC_002643

Expression Profile

//