Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU2059649 |
| length | 988 |
| lncRNA type | inter_gene |
| GC content | 0.44 |
| exon number | 2 |
| gene id | G1799859 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048586.1 |
| NCBI id | CM023240.2 |
| chromosome length | 52474311 |
| location | 31937151 ~ 31938169 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | description |
|---|
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU2059648 | lncRNA | upstream | 473 | 31934579 ~ 31936678 (+) | True | G1799858 |
| TU2059486 | lncRNA | upstream | 190775 | 31745105 ~ 31746376 (+) | True | G1799699 |
| TU2059483 | lncRNA | upstream | 199112 | 31736760 ~ 31738039 (+) | True | cerkl |
| TU2059510 | lncRNA | upstream | 236386 | 31700353 ~ 31700765 (+) | True | G1799723 |
| TU2059477 | lncRNA | upstream | 294092 | 31642743 ~ 31643059 (+) | True | G1799693 |
| TU2059653 | lncRNA | downstream | 6417 | 31944586 ~ 31998314 (+) | True | G1799863 |
| TU2059661 | lncRNA | downstream | 13092 | 31951261 ~ 31956606 (+) | True | G1799871 |
| TU2059700 | lncRNA | downstream | 70335 | 32008504 ~ 32008796 (+) | True | G1799909 |
| TU2059743 | lncRNA | downstream | 148986 | 32087155 ~ 32088558 (+) | True | G1799951 |
| TU2060572 | lncRNA | downstream | 872911 | 32811080 ~ 32811350 (+) | True | G1800724 |
| XR_005038821.1 | mRNA | upstream | 200187 | 31644420 ~ 31736964 (+) | False | cerkl |
| XM_021579536.2 | mRNA | upstream | 200187 | 31644423 ~ 31736964 (+) | False | cerkl |
| XM_021579534.2 | mRNA | upstream | 298553 | 31635510 ~ 31638598 (+) | True | neurod1 |
| XM_036959123.1 | mRNA | upstream | 401630 | 31462452 ~ 31535521 (+) | False | pde1a |
| XM_021579540.2 | mRNA | downstream | 156005 | 32094174 ~ 32144432 (+) | False | cwc22 |
| XM_021579541.2 | mRNA | downstream | 156005 | 32094174 ~ 32144432 (+) | True | cwc22 |
| XM_021579542.2 | mRNA | downstream | 217126 | 32155295 ~ 32312355 (+) | False | znf385b |
| XM_021579544.2 | mRNA | downstream | 275641 | 32213810 ~ 32312355 (+) | False | znf385b |
| XM_021579543.2 | mRNA | downstream | 295920 | 32234089 ~ 32312355 (+) | True | znf385b |
| TU2058268 | other | upstream | 639732 | 31293552 ~ 31297419 (+) | True | G1798597 |
| TU2058247 | other | upstream | 644946 | 31246481 ~ 31292205 (+) | True | G1798579 |
| TU2058047 | other | upstream | 1046084 | 30888661 ~ 30891067 (+) | False | G1798397 |
| TU2059894 | other | downstream | 429467 | 32367636 ~ 32374181 (+) | True | LOC110501767 |
| TU2060607 | other | downstream | 972624 | 32910793 ~ 32914182 (+) | True | G1800754 |
| TU2064746 | other | downstream | 3802270 | 35740439 ~ 35759426 (+) | False | LOC110501795 |
| TU2064995 | other | downstream | 3936393 | 35874562 ~ 35875452 (+) | True | G1804873 |
| TU2065354 | other | downstream | 4425427 | 36363596 ~ 36363930 (+) | True | G1805191 |
