Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU2080471 |
| length | 368 |
| lncRNA type | inter_gene |
| GC content | 0.44 |
| exon number | 1 |
| gene id | G1818259 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048586.1 |
| NCBI id | CM023240.2 |
| chromosome length | 52474311 |
| location | 48951804 ~ 48952171 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU2080466 | lncRNA | downstream | 16787 | 48934141 ~ 48935017 (-) | True | G1818255 |
| TU2080462 | lncRNA | downstream | 20107 | 48926194 ~ 48931697 (-) | False | G1818252 |
| TU2080452 | lncRNA | downstream | 20360 | 48926194 ~ 48931444 (-) | False | G1818252 |
| TU2080453 | lncRNA | downstream | 20360 | 48930282 ~ 48931444 (-) | True | G1818252 |
| TU2080446 | lncRNA | downstream | 20784 | 48928636 ~ 48931020 (-) | False | G1818252 |
| TU2080482 | lncRNA | upstream | 7742 | 48959913 ~ 48960113 (-) | True | G1818270 |
| TU2080514 | lncRNA | upstream | 34100 | 48986271 ~ 48987447 (-) | True | G1818292 |
| TU2080553 | lncRNA | upstream | 64898 | 49017069 ~ 49018034 (-) | False | G1818322 |
| TU2080556 | lncRNA | upstream | 65268 | 49017439 ~ 49018937 (-) | False | G1818322 |
| TU2080554 | lncRNA | upstream | 65432 | 49017603 ~ 49018937 (-) | True | G1818322 |
| XM_021580043.2 | mRNA | downstream | 305883 | 48505445 ~ 48645921 (-) | False | LOC110502188 |
| XM_036959466.1 | mRNA | downstream | 731762 | 48139761 ~ 48220042 (-) | False | LOC110501956 |
| XM_036959601.1 | mRNA | upstream | 10041 | 48962212 ~ 48964633 (-) | True | LOC118943644 |
| XM_036959089.1 | mRNA | upstream | 517931 | 49470102 ~ 49480960 (-) | True | LOC118943599 |
| XR_005038852.1 | mRNA | upstream | 1170717 | 50122888 ~ 50243942 (-) | False | prkag3b |
| XM_036959479.1 | mRNA | upstream | 1170717 | 50122888 ~ 50243944 (-) | False | prkag3b |
| XM_036959480.1 | mRNA | upstream | 1170717 | 50122888 ~ 50243944 (-) | False | prkag3b |
| TU2080196 | other | downstream | 323958 | 48627364 ~ 48627846 (-) | True | G1818059 |
| TU2080079 | other | downstream | 481769 | 48469598 ~ 48470035 (-) | True | G1817968 |
| TU2079931 | other | downstream | 491764 | 48459026 ~ 48460040 (-) | True | G1817836 |
| TU2079734 | other | downstream | 660308 | 48268787 ~ 48291496 (-) | True | G1817668 |
| TU2079567 | other | downstream | 888160 | 48062049 ~ 48063644 (-) | True | LOC110501953 |
| TU2080631 | other | upstream | 173343 | 49125514 ~ 49126117 (-) | True | G1818393 |
| TU2080662 | other | upstream | 213580 | 49165751 ~ 49166367 (-) | True | G1818417 |
| TU2081122 | other | upstream | 765461 | 49717632 ~ 49719378 (-) | True | G1818802 |
| TU2081603 | other | upstream | 1257303 | 50209474 ~ 50213886 (-) | True | G1819189 |
| TU2081760 | other | upstream | 1349630 | 50301801 ~ 50305038 (-) | True | G1819250 |
