RNA id: TU2318287


Basic Information

Item Value
RNA id TU2318287
length 565
RNA type TUCP
GC content 0.44
exon number 1
gene id G2027052
representative True

Chromosome Information

Item Value
chromosome id NC_048590.1
NCBI id CM023244.2
chromosome length 51113553
location 37490852 ~ 37491416 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

CtattacctgtctgtctctactccaTGGCTGTCACtattacctgtctgtctctactccaTGGTTGTCACTTTTACCTGTCTGTCACTACTCCATGGTTGTCACTATTACCTGTCTGTCACTACTCCATGGTTGTCACTATTACCTGTCTGTCACCACTCCATGGTTGTCAGTATTACCTGTCTGTCACTACTCCATGGTTGTCACTAttacctgtctgtctccactccaTGGTTGTCACtattacctgtctgtctctactccaTGGTTGTCACTATTACCTGTCTGTCACTACTCCATGGTTGTCACTATTACCTGTTTTTCACTACTCCATGGTTGTCACTATTACCTGTCTGTCACTACTCCATGGTTGTCACTAttacctgtctgtctccactccaTGGTTGTCACTATTACCTGTCTTTCACTACTCCATGGTTGTCACTATTACCTGTCTGTCACTACTCCATGGTTGTCACtattacctgtctgtctctactccaTGGTTGTCACtattacctgtctgtctctactccaTGGTTGTCACTATTACCTGTCTGTTTCCAC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU2318255 lncRNA downstream 39183 37451435 ~ 37451669 (-) True G2027023
TU2318253 lncRNA downstream 42967 37447662 ~ 37447885 (-) True G2027021
TU2318216 lncRNA downstream 76235 37414329 ~ 37414617 (-) True G2026985
TU2318214 lncRNA downstream 77992 37412518 ~ 37412860 (-) True G2026983
TU2318209 lncRNA downstream 88894 37401442 ~ 37401958 (-) True G2026978
TU2318289 lncRNA upstream 1226 37492642 ~ 37493855 (-) True G2027054
TU2318292 lncRNA upstream 4860 37496276 ~ 37496517 (-) True G2027057
TU2318404 lncRNA upstream 98539 37589955 ~ 37590196 (-) True G2027153
TU2318408 lncRNA upstream 104737 37596153 ~ 37596372 (-) True G2027157
TU2318416 lncRNA upstream 113363 37604779 ~ 37605018 (-) True G2027165
XM_021586585.2 mRNA downstream 182606 37304850 ~ 37308246 (-) False LOC110506744
XM_021586586.2 mRNA downstream 182606 37304850 ~ 37308246 (-) True LOC110506744
XM_021586581.2 mRNA downstream 567370 36914774 ~ 36923482 (-) True LOC110506741
XM_021586580.2 mRNA downstream 567372 36914774 ~ 36923480 (-) False LOC110506741
XR_005039853.1 mRNA upstream 307981 37799397 ~ 37800662 (-) False LOC118944515
XR_005039857.1 mRNA upstream 307981 37799397 ~ 37800662 (-) False LOC118944515
XR_005039855.1 mRNA upstream 307981 37799397 ~ 37800705 (-) False LOC118944515
XR_005039856.1 mRNA upstream 307981 37799397 ~ 37800705 (-) False LOC118944515
XR_005039854.1 mRNA upstream 307981 37799397 ~ 37800736 (-) False LOC118944515
TU2318224 other downstream 69815 37420411 ~ 37421037 (-) True G2026993
TU2317552 other downstream 614749 36834733 ~ 36876103 (-) False LOC110506740
TU2317556 other downstream 614856 36834733 ~ 36875996 (-) True LOC110506740
TU2316868 other downstream 1147418 36343156 ~ 36343434 (-) True G2025757
TU2316067 other downstream 1942095 35548260 ~ 35548757 (-) True LOC110506721
TU2319582 other upstream 846437 38337853 ~ 38348356 (-) True LOC110506753
TU2319612 other upstream 989186 38480602 ~ 38504135 (-) True LOC110506757
TU2320352 other upstream 1734947 39226363 ~ 39227059 (-) True G2028777
TU2320355 other upstream 1737713 39229129 ~ 39230810 (-) False G2028779
TU2320356 other upstream 1737713 39229129 ~ 39230514 (-) False G2028779

Expression Profile