RNA id: TU2440747



Basic Information


Item Value
RNA id TU2440747
length 207
lncRNA type intronic
GC content 0.43
exon number 1
gene id G2134548
representative True

Chromosome Information


Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 37971427 ~ 37971633 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


ctccaatacattaactttgttgtccttaagccattttgccacaactttggaagtatgcttggggtcattgtccatttggaagacccatttgcccaccaagctttaacttcctgactgatgtcttgcttcaatatatccacatacttttccttcctcctgatgccatctattttgtgaagtgcaccagtctctcctgcagcaaagcac

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU2440745 lncRNA downstream 1080 37970115 ~ 37970347 (-) True G2134546
TU2440719 lncRNA downstream 30281 37911014 ~ 37941146 (-) True G2134522
TU2440699 lncRNA downstream 88121 37875312 ~ 37883306 (-) True G2134503
TU2440698 lncRNA downstream 89417 37874812 ~ 37882010 (-) True G2134502
TU2440690 lncRNA downstream 110044 37860328 ~ 37861383 (-) True G2134496
TU2440777 lncRNA upstream 59790 38031423 ~ 38032037 (-) True G2134578
TU2440781 lncRNA upstream 64349 38035982 ~ 38083851 (-) True G2134582
TU2440800 lncRNA upstream 101419 38073052 ~ 38084178 (-) True G2134600
TU2440838 lncRNA upstream 176956 38148589 ~ 38148792 (-) True G2134638
TU2440858 lncRNA upstream 201691 38173324 ~ 38173571 (-) True G2134658
XM_036966375.1 mRNA downstream 366547 37578708 ~ 37604880 (-) False LOC110509123
XM_021590092.2 mRNA downstream 410217 37546812 ~ 37561210 (-) True inhbab
XM_021590091.2 mRNA downstream 497879 37471456 ~ 37473548 (-) True LOC110509120
XM_036966595.1 mRNA downstream 500583 37337525 ~ 37470844 (-) True fbxl7
XM_021590087.2 mRNA downstream 546232 37337525 ~ 37425195 (-) False fbxl7
XM_036966303.1 mRNA upstream 603084 38574717 ~ 38625443 (-) False LOC110509132
XM_036966302.1 mRNA upstream 603084 38574717 ~ 38625444 (-) False LOC110509132
XM_036966304.1 mRNA upstream 603084 38574717 ~ 38637568 (-) False LOC110509132
XM_036966300.1 mRNA upstream 603084 38574717 ~ 38644749 (-) False LOC110509132
XM_036966299.1 mRNA upstream 603084 38574717 ~ 38644750 (-) True LOC110509132
TU2440638 other downstream 31584 37766718 ~ 37939843 (-) True LOC110509127
TU2439020 other downstream 1413974 36556500 ~ 36557453 (-) True LOC110509111
TU2438987 other downstream 1708097 36263002 ~ 36263330 (-) True G2133007
TU2438933 other downstream 1721652 36235515 ~ 36249775 (-) False G2132966
TU2440825 other upstream 156496 38128129 ~ 38130407 (-) True G2134625
TU2441345 other upstream 547938 38519571 ~ 38526920 (-) True G2135034
TU2442402 other upstream 1033828 39005461 ~ 39006050 (-) True G2135837
TU2442821 other upstream 1832162 39803795 ~ 39829179 (-) True LOC110509145
TU2442908 other upstream 1971520 39943153 ~ 39945834 (-) True G2136189

Expression Profile