RNA id: TU2440781



Basic Information


Item Value
RNA id TU2440781
length 205
lncRNA type inter_gene
GC content 0.40
exon number 2
gene id G2134582
representative True

Chromosome Information


Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 38035982 ~ 38083851 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


gcttttaacggacctctgaaactatcacagtgcaggtgcatttatacggagacgtgattacacacaggtggattgtatttatcatcattagtcatttaggtcaacattggatcattcagagatcctcactgaacttctggagagagtttgctgcactgaaagtaaaggggctgaataattttgcacgcccaatttttcagttttt

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU2440777 lncRNA downstream 3945 38031423 ~ 38032037 (-) True G2134578
TU2440747 lncRNA downstream 64349 37971427 ~ 37971633 (-) True G2134548
TU2440745 lncRNA downstream 65635 37970115 ~ 37970347 (-) True G2134546
TU2440719 lncRNA downstream 94836 37911014 ~ 37941146 (-) True G2134522
TU2440699 lncRNA downstream 152676 37875312 ~ 37883306 (-) True G2134503
TU2440838 lncRNA upstream 64738 38148589 ~ 38148792 (-) True G2134638
TU2440858 lncRNA upstream 89473 38173324 ~ 38173571 (-) True G2134658
TU2441169 lncRNA upstream 94401 38178252 ~ 38179595 (-) False G2134883
TU2441171 lncRNA upstream 94401 38178252 ~ 38184787 (-) True G2134883
TU2441188 lncRNA upstream 127149 38211000 ~ 38232889 (-) False G2134897
XM_036966775.1 mRNA downstream 39760 37766370 ~ 37996222 (-) False LOC110509127
XM_036966776.1 mRNA downstream 40924 37766370 ~ 37995058 (-) False LOC110509127
XM_036966375.1 mRNA downstream 431102 37578708 ~ 37604880 (-) False LOC110509123
XM_021590092.2 mRNA downstream 474772 37546812 ~ 37561210 (-) True inhbab
XM_021590091.2 mRNA downstream 562434 37471456 ~ 37473548 (-) True LOC110509120
XM_036966303.1 mRNA upstream 490866 38574717 ~ 38625443 (-) False LOC110509132
XM_036966302.1 mRNA upstream 490866 38574717 ~ 38625444 (-) False LOC110509132
XM_036966304.1 mRNA upstream 490866 38574717 ~ 38637568 (-) False LOC110509132
XM_036966300.1 mRNA upstream 490866 38574717 ~ 38644749 (-) False LOC110509132
XM_036966299.1 mRNA upstream 490866 38574717 ~ 38644750 (-) True LOC110509132
TU2440638 other downstream 96139 37766718 ~ 37939843 (-) True LOC110509127
TU2439020 other downstream 1478529 36556500 ~ 36557453 (-) True LOC110509111
TU2438987 other downstream 1772652 36263002 ~ 36263330 (-) True G2133007
TU2438933 other downstream 1786207 36235515 ~ 36249775 (-) False G2132966
TU2440825 other upstream 44278 38128129 ~ 38130407 (-) True G2134625
TU2441345 other upstream 435720 38519571 ~ 38526920 (-) True G2135034
TU2442402 other upstream 921610 39005461 ~ 39006050 (-) True G2135837
TU2442821 other upstream 1719944 39803795 ~ 39829179 (-) True LOC110509145
TU2442908 other upstream 1859302 39943153 ~ 39945834 (-) True G2136189

Expression Profile