RNA id: TU2531468



Basic Information


Item Value
RNA id TU2531468
length 265
lncRNA type inter_gene
GC content 0.58
exon number 1
gene id G2212902
representative True

Chromosome Information


Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 21899269 ~ 21899533 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


ggttgttgtccttgatgatcgttttggccttcctgtgacagcgggtggtgtaggtgtcctggagggcaggtagtttgcccccggtgatgctttgtgcagacctcactaccctttggagagccttacggttgtgggcgaagCAGTTGCagtatcaggcggtgatacagcccagcaggatgctctcgattgtgcatctgggggtggcccgtcagaaagtccaggacccactTGCatagggcggggtcaagacccagggtctcgagct

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU2531454 lncRNA downstream 17134 21881929 ~ 21882135 (-) True G2212889
TU2531453 lncRNA downstream 18488 21880563 ~ 21880781 (-) True G2212888
TU2531447 lncRNA downstream 32460 21866528 ~ 21866809 (-) True G2212882
TU2531351 lncRNA downstream 153343 21727565 ~ 21745926 (-) True G2212790
TU2531314 lncRNA downstream 229930 21668927 ~ 21669339 (-) True G2212758
TU2531472 lncRNA upstream 4315 21903848 ~ 21904070 (-) True G2212906
TU2531460 lncRNA upstream 17541 21917074 ~ 21918222 (-) True G2212895
TU2531532 lncRNA upstream 111256 22010789 ~ 22013902 (-) False LOC110521551
TU2531533 lncRNA upstream 111256 22010789 ~ 22013902 (-) True LOC110521551
TU2531545 lncRNA upstream 130470 22030003 ~ 22030255 (-) True G2212975
XM_021599152.2 mRNA downstream 98452 21667199 ~ 21800817 (-) False LOC110521548
XM_036969088.1 mRNA upstream 110810 22010343 ~ 22036740 (-) False LOC110521551
XM_036969087.1 mRNA upstream 110810 22010343 ~ 22066361 (-) False LOC110521551
XM_021599165.2 mRNA upstream 110810 22010343 ~ 22107387 (-) False LOC110521551
XM_036969086.1 mRNA upstream 110810 22010343 ~ 22107387 (-) False LOC110521551
XR_002473164.2 mRNA upstream 110810 22010343 ~ 22107387 (-) False LOC110521551
TU2531311 other downstream 232654 21665964 ~ 21666615 (-) True G2212755
TU2529695 other downstream 592727 21304841 ~ 21306542 (-) True G2211274
TU2529119 other downstream 1376158 20518340 ~ 20523111 (-) False G2210769
TU2529121 other downstream 1379727 20518340 ~ 20519542 (-) False G2210769
TU2528844 other downstream 1764054 20134136 ~ 20135215 (-) True LOC110521508
TU2531474 other upstream 8430 21907963 ~ 21910736 (-) True G2212908
TU2532098 other upstream 1086826 22986359 ~ 23001248 (-) True LOC110521564
TU2532275 other upstream 1278973 23178506 ~ 23179611 (-) True G2213654
TU2532260 other upstream 1298114 23197647 ~ 23199406 (-) False G2213647
TU2536522 other upstream 4017821 25917354 ~ 25920245 (-) False G2217605

Expression Profile