Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00058736 |
| length | 833 |
| RNA type | mRNA |
| GC content | 0.44 |
| exon number | 7 |
| gene id | XLOC_030020 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_007116.7 |
| NCBI id | CM002889.2 |
| chromosome length | 72500376 |
| location | 22264051 ~ 22293498 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0007165 | signal transduction | biological_process |
| GO:0005096 | GTPase activator activity | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-060526-383 | Predicted to enable GTPase activator activity. Predicted to act upstream of or within signal transduction. Orthologous to human ARHGAP20 (Rho GTPase activating protein 20). |
| ensembl_id | ENSDART00000143314 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00061683 | lncRNA | upstream | 29357 | 22231214 ~ 22234694 (+) | True | XLOC_030019 |
| TCONS_00061431 | lncRNA | upstream | 169687 | 22085537 ~ 22094364 (+) | True | XLOC_030015 |
| TCONS_00061430 | lncRNA | upstream | 255984 | 22007779 ~ 22008067 (+) | True | XLOC_030013 |
| TCONS_00061429 | lncRNA | upstream | 978504 | 21285042 ~ 21285547 (+) | True | XLOC_030008 |
| TCONS_00058718 | lncRNA | upstream | 1418628 | 20843977 ~ 20845423 (+) | True | XLOC_029998 |
| TCONS_00061432 | lncRNA | downstream | 102976 | 22396474 ~ 22404667 (+) | True | XLOC_030023 |
| TCONS_00061684 | lncRNA | downstream | 576813 | 22870311 ~ 22892701 (+) | True | XLOC_030032 |
| TCONS_00061685 | lncRNA | downstream | 577420 | 22870918 ~ 22874128 (+) | True | XLOC_030033 |
| TCONS_00058749 | lncRNA | downstream | 676137 | 22969635 ~ 22972320 (+) | False | XLOC_030034 |
| TCONS_00058770 | lncRNA | downstream | 897426 | 23190924 ~ 23194639 (+) | True | XLOC_030044 |
| TCONS_00058735 | mRNA | upstream | 37406 | 22177033 ~ 22226645 (+) | True | XLOC_030018 |
| TCONS_00058734 | mRNA | upstream | 90014 | 22133153 ~ 22174037 (+) | True | XLOC_030017 |
| TCONS_00058733 | mRNA | upstream | 157457 | 22098591 ~ 22106594 (+) | True | XLOC_030016 |
| TCONS_00058732 | mRNA | upstream | 193822 | 22067570 ~ 22070229 (+) | True | XLOC_030014 |
| TCONS_00058731 | mRNA | upstream | 331860 | 21931124 ~ 21932191 (+) | True | XLOC_030012 |
| TCONS_00058737 | mRNA | downstream | 14107 | 22307605 ~ 22324762 (+) | False | XLOC_030021 |
| TCONS_00058739 | mRNA | downstream | 76669 | 22370167 ~ 22394272 (+) | False | XLOC_030022 |
| TCONS_00058740 | mRNA | downstream | 100003 | 22393501 ~ 22394538 (+) | True | XLOC_030022 |
| TCONS_00058741 | mRNA | downstream | 113174 | 22406672 ~ 22424496 (+) | True | XLOC_030024 |
| TCONS_00058742 | mRNA | downstream | 165589 | 22459087 ~ 22459555 (+) | True | XLOC_030025 |
| TCONS_00058727 | other | upstream | 985550 | 21274165 ~ 21278501 (+) | True | XLOC_030007 |
| TCONS_00058726 | other | upstream | 992692 | 21270450 ~ 21271359 (+) | True | XLOC_030006 |
| TCONS_00058725 | other | upstream | 1004813 | 21258218 ~ 21259238 (+) | True | XLOC_030005 |
| TCONS_00058714 | other | upstream | 1589001 | 20674933 ~ 20675050 (+) | True | XLOC_029996 |
| TCONS_00058694 | other | upstream | 2186241 | 20077694 ~ 20077810 (+) | True | XLOC_029982 |
| TCONS_00058738 | other | downstream | 25351 | 22318849 ~ 22327098 (+) | True | XLOC_030021 |
| TCONS_00058753 | other | downstream | 677314 | 22970812 ~ 22972320 (+) | True | XLOC_030034 |
| TCONS_00058767 | other | downstream | 887007 | 23180505 ~ 23188247 (+) | False | XLOC_030043 |
| TCONS_00058768 | other | downstream | 887034 | 23180532 ~ 23187739 (+) | True | XLOC_030043 |
| TCONS_00058777 | other | downstream | 1274849 | 23568347 ~ 23568462 (+) | True | XLOC_030049 |
