Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00058738 |
| length | 785 |
| RNA type | processed_transcript |
| GC content | 0.45 |
| exon number | 3 |
| gene id | XLOC_030021 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_007116.7 |
| NCBI id | CM002889.2 |
| chromosome length | 72500376 |
| location | 22307605 ~ 22327098 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0007165 | signal transduction | biological_process |
| GO:0005096 | GTPase activator activity | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-060526-383 | Predicted to enable GTPase activator activity. Predicted to act upstream of or within signal transduction. Orthologous to human ARHGAP20 (Rho GTPase activating protein 20). |
| ensembl_id | ENSDART00000137321 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00061683 | lncRNA | upstream | 84155 | 22231214 ~ 22234694 (+) | True | XLOC_030019 |
| TCONS_00061431 | lncRNA | upstream | 224485 | 22085537 ~ 22094364 (+) | True | XLOC_030015 |
| TCONS_00061430 | lncRNA | upstream | 310782 | 22007779 ~ 22008067 (+) | True | XLOC_030013 |
| TCONS_00061429 | lncRNA | upstream | 1033302 | 21285042 ~ 21285547 (+) | True | XLOC_030008 |
| TCONS_00058718 | lncRNA | upstream | 1473426 | 20843977 ~ 20845423 (+) | True | XLOC_029998 |
| TCONS_00061432 | lncRNA | downstream | 69376 | 22396474 ~ 22404667 (+) | True | XLOC_030023 |
| TCONS_00061684 | lncRNA | downstream | 543213 | 22870311 ~ 22892701 (+) | True | XLOC_030032 |
| TCONS_00061685 | lncRNA | downstream | 543820 | 22870918 ~ 22874128 (+) | True | XLOC_030033 |
| TCONS_00058749 | lncRNA | downstream | 642537 | 22969635 ~ 22972320 (+) | False | XLOC_030034 |
| TCONS_00058770 | lncRNA | downstream | 863826 | 23190924 ~ 23194639 (+) | True | XLOC_030044 |
| TCONS_00058736 | mRNA | upstream | 25351 | 22264051 ~ 22293498 (+) | True | XLOC_030020 |
| TCONS_00058735 | mRNA | upstream | 92204 | 22177033 ~ 22226645 (+) | True | XLOC_030018 |
| TCONS_00058734 | mRNA | upstream | 144812 | 22133153 ~ 22174037 (+) | True | XLOC_030017 |
| TCONS_00058733 | mRNA | upstream | 212255 | 22098591 ~ 22106594 (+) | True | XLOC_030016 |
| TCONS_00058732 | mRNA | upstream | 248620 | 22067570 ~ 22070229 (+) | True | XLOC_030014 |
| TCONS_00058739 | mRNA | downstream | 43069 | 22370167 ~ 22394272 (+) | False | XLOC_030022 |
| TCONS_00058740 | mRNA | downstream | 66403 | 22393501 ~ 22394538 (+) | True | XLOC_030022 |
| TCONS_00058741 | mRNA | downstream | 79574 | 22406672 ~ 22424496 (+) | True | XLOC_030024 |
| TCONS_00058742 | mRNA | downstream | 131989 | 22459087 ~ 22459555 (+) | True | XLOC_030025 |
| TCONS_00058743 | mRNA | downstream | 183541 | 22510639 ~ 22515186 (+) | True | XLOC_030026 |
| TCONS_00058727 | other | upstream | 1040348 | 21274165 ~ 21278501 (+) | True | XLOC_030007 |
| TCONS_00058726 | other | upstream | 1047490 | 21270450 ~ 21271359 (+) | True | XLOC_030006 |
| TCONS_00058725 | other | upstream | 1059611 | 21258218 ~ 21259238 (+) | True | XLOC_030005 |
| TCONS_00058714 | other | upstream | 1643799 | 20674933 ~ 20675050 (+) | True | XLOC_029996 |
| TCONS_00058694 | other | upstream | 2241039 | 20077694 ~ 20077810 (+) | True | XLOC_029982 |
| TCONS_00058753 | other | downstream | 643714 | 22970812 ~ 22972320 (+) | True | XLOC_030034 |
| TCONS_00058767 | other | downstream | 853407 | 23180505 ~ 23188247 (+) | False | XLOC_030043 |
| TCONS_00058768 | other | downstream | 853434 | 23180532 ~ 23187739 (+) | True | XLOC_030043 |
| TCONS_00058777 | other | downstream | 1241249 | 23568347 ~ 23568462 (+) | True | XLOC_030049 |
| TCONS_00058788 | other | downstream | 1346161 | 23673259 ~ 23673375 (+) | True | XLOC_030053 |
