RNA id: TCONS_00060083


Basic Information

Item Value
RNA id TCONS_00060083
length 132
RNA type rRNA
GC content 0.49
exon number 1
gene id XLOC_030905
representative True

Chromosome Information

Item Value
chromosome id NC_007116.7
NCBI id CM002889.2
chromosome length 72500376
location 14245149 ~ 14245280 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

taatgttttataaccttttgctggcagctagctctctgtaactctcacatggtcgcccactgaagctaagcagggctgtgcctggtcagtacttggatggaagaccacatgtgTTGCTGGAAGTggcgttag

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000172326

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00061956 lncRNA downstream 938444 13277241 ~ 13306705 (-) True XLOC_030893
TCONS_00060062 lncRNA downstream 1078029 13131399 ~ 13167120 (-) True XLOC_030890
TCONS_00061527 lncRNA downstream 1408542 12835526 ~ 12836607 (-) True XLOC_030888
TCONS_00060040 lncRNA downstream 1965022 12272137 ~ 12280127 (-) False XLOC_030879
TCONS_00061955 lncRNA downstream 1965210 12272137 ~ 12279939 (-) False XLOC_030879
TCONS_00061528 lncRNA upstream 275842 14521122 ~ 14522712 (-) True XLOC_030909
TCONS_00061957 lncRNA upstream 535562 14780842 ~ 15176038 (-) False XLOC_030911
TCONS_00061958 lncRNA upstream 751982 14997262 ~ 15176098 (-) False XLOC_030911
TCONS_00061529 lncRNA upstream 754342 14999622 ~ 14999996 (-) True XLOC_030912
TCONS_00061959 lncRNA upstream 762325 15007605 ~ 15175900 (-) False XLOC_030911
TCONS_00060082 mRNA downstream 6071 14165567 ~ 14239078 (-) True XLOC_030904
TCONS_00060081 mRNA downstream 33662 14165567 ~ 14211487 (-) False XLOC_030904
TCONS_00060080 mRNA downstream 396853 13839316 ~ 13848296 (-) True XLOC_030903
TCONS_00060079 mRNA downstream 409593 13785800 ~ 13835556 (-) True XLOC_030902
TCONS_00060077 mRNA downstream 409688 13781968 ~ 13835461 (-) False XLOC_030902
TCONS_00060084 mRNA upstream 61195 14306475 ~ 14344647 (-) False XLOC_030906
TCONS_00060085 mRNA upstream 61195 14306475 ~ 14373662 (-) False XLOC_030906
TCONS_00060086 mRNA upstream 64636 14309916 ~ 14326959 (-) False XLOC_030906
TCONS_00060088 mRNA upstream 129828 14375108 ~ 14390445 (-) True XLOC_030907
TCONS_00060089 mRNA upstream 149043 14394323 ~ 14443124 (-) True XLOC_030908
TCONS_00060070 other downstream 712161 13532874 ~ 13532988 (-) True XLOC_030896
TCONS_00060061 other downstream 1124556 13110935 ~ 13120593 (-) False XLOC_030890
TCONS_00060054 other downstream 1519834 12724462 ~ 12725315 (-) True XLOC_030886
TCONS_00060044 other downstream 1872252 12353721 ~ 12372897 (-) False XLOC_030879
TCONS_00060045 other downstream 1878824 12366209 ~ 12366325 (-) True XLOC_030881
TCONS_00060087 other upstream 122820 14368100 ~ 14372936 (-) True XLOC_030906
TCONS_00060102 other upstream 976735 15222015 ~ 15223457 (-) False XLOC_030914
TCONS_00060112 other upstream 1489245 15734525 ~ 15734580 (-) True XLOC_030920
TCONS_00060114 other upstream 1699131 15944411 ~ 15948833 (-) False XLOC_030923
TCONS_00060129 other upstream 2200069 16445349 ~ 16445465 (-) True XLOC_030930

Expression Profile

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