RNA id: TU4284



Basic Information


Item Value
RNA id TU4284
length 710
lncRNA type inter_gene
GC content 0.48
exon number 2
gene id G3052
representative False

Chromosome Information


Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 9121713 ~ 9124011 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


tcctctctgtcctctttcttctttcttctttctgtcctctttctgtcctttcttctttcctctttctgttctcttgctctctgttctctttcctctttctgtcctctttcttccctctttattcttccctctgtcctctttcttctttctttcttctttctgtcctctcgctccctgttctctttcctctttctgtcctctttcttctctctttattcttccctctgtcctctttcttctttctttcctctttcctctttctgtcctctttcttcttccctctttctgtcctctcgctccctgtcctctttcctctttctgtcctctttcttcttccctctttctgtcctctcgctccctgtcctctttcctctttcttcttccctctttctgtcctctttcttctttctgtcctctttctttctgtcttctttcctctttctgttctctttcttctttcctttctatcctctcgctctctgttgtctttcctttctgtcatcttctttcctctttcttctttcctctttctgtcctctttcttctttctttcctctttcctctttctgtcctctcgctctctgttctctttcctctttctgtcctctttcttctttcctctttctgtcttctgtcctctttcttctttcctctttcttctttctgtcctctttctactttcctctttctgtcctctttcttctttcctc

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU4262 lncRNA downstream 94841 9027007 ~ 9027944 (-) True G3036
XR_005639319.1 lncRNA downstream 136175 8971674 ~ 8986610 (-) True LOC120559564
XR_005639324.1 lncRNA downstream 141807 8974604 ~ 8980978 (-) True LOC120559581
XR_005639204.1 lncRNA downstream 230422 8890846 ~ 8892363 (-) True LOC120558812
TU4174 lncRNA downstream 322056 8800400 ~ 8800729 (-) True G2961
TU4285 lncRNA upstream 2172 9126183 ~ 9126700 (-) True G3053
TU4276 lncRNA upstream 29239 9153250 ~ 9153699 (-) True G3048
TU4277 lncRNA upstream 31928 9155939 ~ 9160172 (-) True G3049
TU4631 lncRNA upstream 283660 9407671 ~ 9496783 (-) True G3309
XR_005639308.1 lncRNA upstream 350675 9474686 ~ 9476015 (-) True LOC120559537
XM_039811212.1 mRNA downstream 111207 9006939 ~ 9011578 (-) True LOC120565400
XM_039801061.1 mRNA downstream 167943 8943845 ~ 8954842 (-) True LOC120559379
XM_039800053.1 mRNA downstream 203641 8912382 ~ 8919144 (-) True dla
XM_039794380.1 mRNA downstream 265080 8818287 ~ 8857705 (-) True myom2a
XM_039800886.1 mRNA upstream 41977 9165988 ~ 9246905 (-) True lcor
XM_039801172.1 mRNA upstream 180936 9304947 ~ 9331554 (-) True hoga1
XM_039801145.1 mRNA upstream 272819 9396830 ~ 9412357 (-) True LOC120559457
XM_039801126.1 mRNA upstream 353669 9477680 ~ 9489740 (-) True LOC120559444
XM_039801132.1 mRNA upstream 353669 9477680 ~ 9489641 (-) False LOC120559444
TU4231 other downstream 214699 8905672 ~ 8908086 (-) True G3011
TU4151 other downstream 354812 8758649 ~ 8767973 (-) True G2938
TU4012 other downstream 621644 8483712 ~ 8501141 (-) False wipf2a
TU3972 other downstream 913250 8207252 ~ 8209535 (-) False G2840
TU4635 other upstream 401532 9525543 ~ 9549898 (-) False G3312
TU4646 other upstream 425970 9549981 ~ 9567228 (-) False LOC120559295
TU4721 other upstream 902259 10026270 ~ 10042004 (-) True G3373
TU4974 other upstream 1775547 10899558 ~ 10905235 (-) True G3586
TU4966 other upstream 1853632 10977643 ~ 10993201 (-) False nacc1b

Expression Profile