RNA id: TU125127


Basic Information

Item Value
RNA id TU125127
length 458
lncRNA type intronic
GC content 0.49
exon number 2
gene id G92838
representative False

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 3425734 ~ 3490621 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

tctgtctgtttgtgtgtctgtgtgtgtgtgtgtctctctgtttgtgtgtctctctgtgtgtgtgtgtctgtctgtctgtgtgtctctgtgtctgtgtctctctgtgtgtgtgtctctctgtatgtgtgtgtgtctctgtctgtctgtgtgtgtgtctctgtgtgtgtctctgtctgtctgtgtgtgtgtctctgtctgtgtgtctctgtctgtgtgtgtgtctctgtgtgtgtgtgtgtctctgtctgtgtgtgtgtgtgtctctgtgtgtgtgtgtgtctctgtctgtctgtgtgtgtgtctctgtgtgtgtctgtgtctctgtctctgtgtgtgtgtgtgtctgtgtgtgtgtctgtctgtgtgtctctgtcttgtgtgtgtgtctctgtgtgtgtgtgtgtctctgtctgtgtgtgctctgtctgtgtgtgtgtctctgtgtgtgtgtgtctctg

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU125106 lncRNA upstream 4558 3362092 ~ 3421936 (+) True G92827
TU125085 lncRNA upstream 26895 3351767 ~ 3399599 (+) False G92826
TU125097 lncRNA upstream 72561 3351767 ~ 3353933 (+) False G92826
TU125048 lncRNA upstream 239918 3186172 ~ 3186576 (+) False G92799
TU125034 lncRNA upstream 254312 3165682 ~ 3172182 (+) True G92786
TU125150 lncRNA downstream 6475 3496835 ~ 3563459 (+) False G92845
TU125159 lncRNA downstream 6475 3496835 ~ 3563459 (+) False G92845
TU125172 lncRNA downstream 49674 3540034 ~ 3595388 (+) False LOC120565459
TU125149 lncRNA downstream 70675 3561035 ~ 3563459 (+) False G92845
TU125157 lncRNA downstream 70675 3561035 ~ 3563459 (+) False G92845
XM_039811258.1 mRNA upstream 78278 3337832 ~ 3348216 (+) True LOC120565455
XM_039811247.1 mRNA upstream 423955 2999620 ~ 3002539 (+) True LOC120565438
XM_039811246.1 mRNA upstream 567376 2845744 ~ 2859118 (+) True LOC120565437
XM_039811225.1 mRNA upstream 585635 2821642 ~ 2840859 (+) True LOC120565422
XM_039811224.1 mRNA upstream 832511 2586515 ~ 2593983 (+) True LOC120565421
XM_039812269.1 mRNA downstream 139824 3630184 ~ 3633365 (+) True LOC120566051
XM_039812272.1 mRNA downstream 139824 3630184 ~ 3633365 (+) False LOC120566051
XM_039812271.1 mRNA downstream 139824 3630184 ~ 3633365 (+) False LOC120566051
XM_039811503.1 mRNA downstream 224559 3714919 ~ 3823782 (+) True frem1b
XM_039811967.1 mRNA downstream 336503 3826863 ~ 3854810 (+) True LOC120565880
TU125102 other upstream 59765 3351767 ~ 3366729 (+) True G92826
TU125014 other upstream 294290 3125889 ~ 3132204 (+) True G92782
TU124988 other upstream 332084 3011766 ~ 3094410 (+) True G92773
TU124992 other upstream 332084 3011766 ~ 3094410 (+) False G92773
TU124998 other upstream 411641 3010674 ~ 3014853 (+) False G92773
TU125164 other downstream 67637 3557997 ~ 3577980 (+) False LOC120565459
TU125178 other downstream 101745 3592105 ~ 3593384 (+) False LOC120565459
TU125177 other downstream 110618 3600978 ~ 3606825 (+) True G92848
TU125669 other downstream 706464 4196824 ~ 4217826 (+) True G93150
TU125644 other downstream 794542 4284902 ~ 4297410 (+) True LOC120565391

Expression Profile