RNA id: TCONS_00067537


Basic Information

Item Value
RNA id TCONS_00067537
length 268
RNA type mRNA
GC content 0.40
exon number 2
gene id XLOC_034703
representative False

Chromosome Information

Item Value
chromosome id NC_007118.7
NCBI id CM002891.2
chromosome length 74282399
location 23967332 ~ 23996133 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

GTTCACAAGGTGTTTTCTGTGAGGTTCAGCCTACAGATGGATTGCGGATCGAATTTCTGACAAAGCTGGGGTTTCTGGAAATCCTCCGTGGAGAAGCACGACCAAGAGAAGGGGAGTTCATGTTGGAATTGTGATGTGCACTGGAAGGTATCAGCTTAGGTAGGTGAAATTTCATGtttgcatttaatgtttttaaggATTATGGTACAGTGCAAATGCAGTTTTTGTAACAATggaataaaacatgtttacagcatcATTCAAATCT

Function

GO: NA

KEGG: NA

ZFIN:

id description
ZDB-GENE-160728-23 Predicted to enable hydrolase activity, acting on glycosyl bonds. Orthologous to human OGA (O-GlcNAcase).

Ensembl:

ensembl_id ENSDART00000173603

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00069204 lncRNA downstream 17647 23946001 ~ 23949685 (-) True XLOC_034702
TCONS_00067534 lncRNA downstream 60839 23902484 ~ 23906493 (-) False XLOC_034701
TCONS_00069203 lncRNA downstream 60843 23903295 ~ 23906489 (-) False XLOC_034701
TCONS_00067536 lncRNA downstream 60906 23903527 ~ 23906426 (-) True XLOC_034701
TCONS_00067535 lncRNA downstream 63179 23902916 ~ 23904153 (-) False XLOC_034701
TCONS_00067545 lncRNA upstream 87271 24058768 ~ 24069896 (-) True XLOC_034707
TCONS_00067559 lncRNA upstream 388650 24360147 ~ 24364826 (-) False XLOC_034714
TCONS_00067560 lncRNA upstream 390809 24362306 ~ 24364715 (-) True XLOC_034714
TCONS_00067563 lncRNA upstream 406724 24378221 ~ 24390807 (-) False XLOC_034716
TCONS_00067564 lncRNA upstream 408687 24380184 ~ 24390822 (-) False XLOC_034716
TCONS_00067533 mRNA downstream 72453 23886756 ~ 23894879 (-) True XLOC_034700
TCONS_00067532 mRNA downstream 94159 23865336 ~ 23873173 (-) True XLOC_034699
TCONS_00067526 mRNA downstream 119320 23748971 ~ 23848012 (-) False XLOC_034697
TCONS_00067539 mRNA upstream 30599 24002096 ~ 24005268 (-) True XLOC_034704
TCONS_00067540 mRNA upstream 44010 24015507 ~ 24022340 (-) True XLOC_034705
TCONS_00067541 mRNA upstream 67967 24039464 ~ 24046999 (-) False XLOC_034706
TCONS_00067542 mRNA upstream 69678 24041175 ~ 24047021 (-) False XLOC_034706
TCONS_00067543 mRNA upstream 70004 24041501 ~ 24047030 (-) False XLOC_034706
TCONS_00067518 other downstream 1030084 22937129 ~ 22937248 (-) True XLOC_034690
TCONS_00067494 other downstream 2130466 21836676 ~ 21836866 (-) True XLOC_034675
TCONS_00067493 other downstream 2136482 21830686 ~ 21830850 (-) True XLOC_034674
TCONS_00067492 other downstream 2143805 21823363 ~ 21823527 (-) True XLOC_034673
TCONS_00067455 other downstream 4011140 19956078 ~ 19956192 (-) True XLOC_034652
TCONS_00067552 other upstream 216084 24187581 ~ 24193080 (-) False XLOC_034711
TCONS_00067584 other upstream 869204 24840701 ~ 24853898 (-) True XLOC_034727
TCONS_00067600 other upstream 1319536 25291033 ~ 25291152 (-) True XLOC_034734
TCONS_00067607 other upstream 1791687 25763184 ~ 25763298 (-) True XLOC_034737
TCONS_00067608 other upstream 1819732 25791229 ~ 25791355 (-) True XLOC_034738