RNA id: TCONS_00067494


Basic Information

Item Value
RNA id TCONS_00067494
length 191
RNA type snRNA
GC content 0.48
exon number 1
gene id XLOC_034675
representative True

Chromosome Information

Item Value
chromosome id NC_007118.7
NCBI id CM002891.2
chromosome length 74282399
location 21836676 ~ 21836866 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

ATCGCTTCTCGGCCTTTTGGCTAAGATCAAGTGTAGTATCTGTTCTTATCAGTTTAATATCTGATACGTGCCCTACCCGGGCACCATATATTAAATTGATTTTTGGAATAGGGAGATGGAATAGGGGCTTGCTCCGTCCACTCCACGCATCGACCCGGTATTGCAGTACTTCCGGGAACGGTGCACCCCCT

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000115842

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00069193 lncRNA downstream 742777 21088553 ~ 21093899 (-) True XLOC_034671
TCONS_00068675 lncRNA downstream 1039637 20790598 ~ 20797039 (-) True XLOC_034668
TCONS_00069192 lncRNA downstream 1168980 20629495 ~ 20667696 (-) True XLOC_034665
TCONS_00067479 lncRNA downstream 1254203 20581550 ~ 20582473 (-) True XLOC_034663
TCONS_00067477 lncRNA downstream 1257443 20577723 ~ 20579233 (-) False XLOC_034663
TCONS_00069195 lncRNA upstream 7038 21843904 ~ 21870352 (-) True XLOC_034676
TCONS_00067496 lncRNA upstream 41579 21878445 ~ 21882149 (-) True XLOC_034677
TCONS_00069196 lncRNA upstream 406386 22243252 ~ 22245553 (-) True XLOC_034682
TCONS_00067507 lncRNA upstream 793038 22629904 ~ 22632999 (-) False XLOC_034684
TCONS_00067510 lncRNA upstream 828070 22664936 ~ 22667597 (-) True XLOC_034685
TCONS_00067490 mRNA downstream 971671 20859437 ~ 20865005 (-) True XLOC_034670
TCONS_00067489 mRNA downstream 1000051 20826240 ~ 20836625 (-) True XLOC_034669
TCONS_00067488 mRNA downstream 1039741 20779026 ~ 20796935 (-) False XLOC_034668
TCONS_00067487 mRNA downstream 1058092 20777357 ~ 20778584 (-) True XLOC_034667
TCONS_00067486 mRNA downstream 1058102 20771754 ~ 20778574 (-) False XLOC_034667
TCONS_00067495 mRNA upstream 39682 21876548 ~ 21887104 (-) False XLOC_034677
TCONS_00067497 mRNA upstream 53607 21890473 ~ 21905995 (-) False XLOC_034678
TCONS_00067498 mRNA upstream 54386 21891252 ~ 21905851 (-) False XLOC_034678
TCONS_00067499 mRNA upstream 54386 21891252 ~ 21918432 (-) True XLOC_034678
TCONS_00067500 mRNA upstream 83796 21920662 ~ 21924372 (-) False XLOC_034679
TCONS_00067493 other downstream 5826 21830686 ~ 21830850 (-) True XLOC_034674
TCONS_00067492 other downstream 13149 21823363 ~ 21823527 (-) True XLOC_034673
TCONS_00067455 other downstream 1880484 19956078 ~ 19956192 (-) True XLOC_034652
TCONS_00067426 other downstream 3008703 18826974 ~ 18827973 (-) True XLOC_034629
TCONS_00067412 other downstream 3267343 18563764 ~ 18569333 (-) True XLOC_034622
TCONS_00067518 other upstream 1100263 22937129 ~ 22937248 (-) True XLOC_034690
TCONS_00067552 other upstream 2350715 24187581 ~ 24193080 (-) False XLOC_034711
TCONS_00067584 other upstream 3003835 24840701 ~ 24853898 (-) True XLOC_034727
TCONS_00067600 other upstream 3454167 25291033 ~ 25291152 (-) True XLOC_034734
TCONS_00067607 other upstream 3926318 25763184 ~ 25763298 (-) True XLOC_034737

Expression Profile

//