RNA id: TU202625



Basic Information


Item Value
RNA id TU202625
length 297
lncRNA type inter_gene
GC content 0.56
exon number 2
gene id G149817
representative False

Chromosome Information


Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 37585148 ~ 37632587 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


TGGTAGTTAAGGTGTATGTTACCGGGGTAACCCTTGATGAAGCTGCGGTACAGGTCTCCCAGCTTCTCTCCGCTGATGTGTCTGGCGGGGTCGTCAGGTGACTTGAAGTCCAGGTCGTACTTCCCGCTGCGGTAGAACTCGGACGCCGCCACGTCCATCCCGATGATGATCTTGTCGGGGTAGCCGGCCTTCTCGATGGCTGACTTCAGGAGCTCCAGagctacagacacacacacacacacacacacacacacacacacacacacagacacacacacacacacacacacacacaca

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU202501 lncRNA downstream 14441 37567854 ~ 37570707 (-) True G149731
TU202618 lncRNA downstream 21983 37532763 ~ 37563165 (-) True G149813
TU202506 lncRNA downstream 27213 37496101 ~ 37557935 (-) True G149736
XR_005641690.1 lncRNA downstream 70012 37513550 ~ 37515136 (-) True LOC120573343
TU202607 lncRNA downstream 139302 37433252 ~ 37445846 (-) False G149805
TU202627 lncRNA upstream 2353 37629730 ~ 37629973 (-) True G149818
TU202651 lncRNA upstream 5267 37632644 ~ 37632886 (-) True G149834
TU202871 lncRNA upstream 23066 37650443 ~ 37652195 (-) True G149946
TU202872 lncRNA upstream 23718 37651095 ~ 37652195 (-) False G149946
TU202888 lncRNA upstream 78135 37705512 ~ 37705713 (-) True G149954
XM_039823045.1 mRNA downstream 18363 37562428 ~ 37566785 (-) False LOC120573352
XM_039823044.1 mRNA downstream 18419 37562428 ~ 37566729 (-) True LOC120573352
XM_039821967.1 mRNA downstream 288983 37289238 ~ 37296165 (-) True LOC120572649
XM_039821965.1 mRNA downstream 329115 37254159 ~ 37256033 (-) True LOC120572647
XM_039821964.1 mRNA downstream 386533 37153240 ~ 37198615 (-) True LOC120572646
XM_039822929.1 mRNA upstream 27314 37654691 ~ 37675082 (-) True LOC120573284
XM_039822914.1 mRNA upstream 52282 37679659 ~ 37692835 (-) False LOC120573273
XM_039822915.1 mRNA upstream 52282 37679659 ~ 37692835 (-) False LOC120573273
XM_039822911.1 mRNA upstream 52282 37679659 ~ 37692835 (-) False LOC120573273
XM_039822912.1 mRNA upstream 52282 37679659 ~ 37692693 (-) True LOC120573273
TU202540 other downstream 511498 37056582 ~ 37073650 (-) False G149751
TU202541 other downstream 511498 37056582 ~ 37073650 (-) True G149751
TU202465 other downstream 789059 36786761 ~ 36796089 (-) False LOC120572643
TU202468 other downstream 814621 36769815 ~ 36770527 (-) True G149706
TU202208 other downstream 1020775 36559507 ~ 36564373 (-) False LOC120572641
TU202911 other upstream 216786 37844163 ~ 37888636 (-) False G149973
TU202908 other upstream 216853 37844230 ~ 37888636 (-) False G149973
TU202913 other upstream 260108 37887485 ~ 37888636 (-) False G149973
TU202950 other upstream 334141 37961518 ~ 37963721 (-) False LOC120572652
XR_005641707.1 other upstream 542116 38169493 ~ 38179480 (-) False LOC120573395

Expression Profile