RNA id: XM_039823044.1


Basic Information

Item Value
RNA id XM_039823044.1
length 1073
RNA type mRNA
GC content 0.61
exon number 6
gene id LOC120573352
representative True

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 37562428 ~ 37566785 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

GTCTGTGGAAAGCAACAGCTTGGAGTAAGCGGAGGGTGAGTAGAGACTCGAACCCGCGGTTCTACTGAATATAGTCCAGTCTGACTGCTTCTGCGGACACTTCCCGGGTCTGTGGACGTTTCCAGCAGCTAACGTGGGGGCGGAGCCAtgctgtgacatcacagtgCCCAGGCGTCCAATGACAGCGCTCGGATCATGGCTGCGTGTGAGACACCACAACGAGCGGACCAATGAGGCGGAAGGACAGCCATGACGGACCGGCACGGGGACAGGGGGGGGGGACGGGGGGCAGTGGTGTTACCGCGGTGACGGGTGGCGGGGAGACAGGCGGCGTTACCGCGGCGACGCTGCCTGTCTTCCTGTTCCCCTCGgagcttctcttcttctctgaaCAGAGACGCTGCCACCGCAGAGTTCTCACTCTCTACAACCCTTACAGCTTCACACTGGACTACAAGAtgttgtgTACGTCTCCGTCTCTGTACCGAGTGCTGGAGGCCGAGGGCAGCGTCCGAGCCAAGTCTTGTGTCGACCTGGTGGTGCGTCACCTAAACGTGTCCCCGGCTAACTGCGGCCGCAGAGACCGGTTCCGCCTGGAGGTGAGAGGAGGAGGCCAGCGGGGGGGACGGGAGGTCTGGGCCGAGCtgagagggggggaggaggggggaggagagggggaggaagaggaggagaggaagaggaggaaaccAGGAGGACACCAGCAGAGGGGGCTGCAGCTGCCACTGGTCCCTACAGctgtgcgTCCCAGTGTGTCTCAGTGGctgctgtgtgtgctgctggccCTGCTGTGTGCCGCAGTGTTGATGCTCCCCCTCCACACTGACAGCGGCTCGATGGTTCCACGCTGCCTGCAcgtctccaccaatcagaagcTGGCCTGCGCCTACACActaggtCTTCTCACCATGGTGTTTCTACGGTGACATCACGCTGCCTCTGCTGTTTTGatggactcacacacacacacacacacacatagacacacacacagacagacacagacacacacagagacacacacacacacagagacacacacacacacacacata

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU202506 lncRNA downstream 4493 37496101 ~ 37557935 (-) True G149736
XR_005641690.1 lncRNA downstream 47292 37513550 ~ 37515136 (-) True LOC120573343
TU202607 lncRNA downstream 116582 37433252 ~ 37445846 (-) False G149805
TU202606 lncRNA downstream 120252 37433252 ~ 37442176 (-) True G149805
TU202509 lncRNA downstream 130291 37410830 ~ 37432137 (-) True G149739
TU202501 lncRNA upstream 1125 37567854 ~ 37570707 (-) True G149731
TU202625 lncRNA upstream 18419 37585148 ~ 37627377 (-) False G149817
TU202642 lncRNA upstream 38807 37605536 ~ 37606441 (-) True G149827
TU202646 lncRNA upstream 51167 37617896 ~ 37621384 (-) True G149830
TU202647 lncRNA upstream 51194 37617923 ~ 37621384 (-) False G149830
XM_039821967.1 mRNA downstream 266263 37289238 ~ 37296165 (-) True LOC120572649
XM_039821965.1 mRNA downstream 306395 37254159 ~ 37256033 (-) True LOC120572647
XM_039821964.1 mRNA downstream 363813 37153240 ~ 37198615 (-) True LOC120572646
XM_039821962.1 mRNA downstream 517140 37019550 ~ 37045288 (-) True LOC120572644
XM_039822307.1 mRNA downstream 698945 36846442 ~ 36863483 (-) True LOC120572832
XM_039822929.1 mRNA upstream 87962 37654691 ~ 37675082 (-) True LOC120573284
XM_039822914.1 mRNA upstream 112930 37679659 ~ 37692835 (-) False LOC120573273
XM_039822915.1 mRNA upstream 112930 37679659 ~ 37692835 (-) False LOC120573273
XM_039822911.1 mRNA upstream 112930 37679659 ~ 37692835 (-) False LOC120573273
XM_039822912.1 mRNA upstream 112930 37679659 ~ 37692693 (-) True LOC120573273
TU202540 other downstream 488778 37056582 ~ 37073650 (-) False G149751
TU202541 other downstream 488778 37056582 ~ 37073650 (-) True G149751
TU202465 other downstream 766339 36786761 ~ 36796089 (-) False LOC120572643
TU202468 other downstream 791901 36769815 ~ 36770527 (-) True G149706
TU202208 other downstream 998055 36559507 ~ 36564373 (-) False LOC120572641
TU202630 other upstream 23866 37590595 ~ 37607056 (-) True G149821
TU202635 other upstream 34213 37600942 ~ 37602820 (-) True G149826
TU202911 other upstream 277434 37844163 ~ 37888636 (-) False G149973
TU202908 other upstream 277501 37844230 ~ 37888636 (-) False G149973
TU202913 other upstream 320756 37887485 ~ 37888636 (-) False G149973

Expression Profile