RNA id: TU203237



Basic Information


Item Value
RNA id TU203237
length 745
lncRNA type inter_gene
GC content 0.35
exon number 2
gene id G150194
representative True

Chromosome Information


Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 38691845 ~ 38694836 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


TTGGAATAAgaatcaaaaatgttgaaaaaaactgacaaaaacataaaaaaacagcgccatttaatttttttttttaaagctaataACCTAAATTGATTTGTGGGTaaaaaaaacgtcagaaaaagtgccaaaaatattgaaaacgACAAAACGGTACAACATTCACACCGCAGACCACAGAGAGAGCCTTTGGAATAGTTTTCAACCCTCGTCATGCCTTCTCGTCGACCATCGGGCAACTTTGTTTTCCTTGTGTTTTTCTAACTCTCTTTTTCGGTATTTCCAGCTCTTTCCTGGCCGCCCTAGTTGAGTCACTGTCAACTTTTGACTTTAAAGTTGtgatttctgtattttgtgaagCTCTGCGACAACACAAATGGTTGAGCCCAGACGTCCAAGCCCCAAAACAGcgggaaagtgacaaaaacattttaaaaaagcgcctaaaatgtgacaaaacgtcgagaaaaacatcacaaatgttgaaaaaagaggcTAAAGCATAGAAAAAAGCGCTGACAATGTTGAATAAATGGCAAAAACGTTGGAATAAgaatcaaaaatgttgaaaaaaactgacaaaaacataaaaaacacagcgccatttaattttttttttaaagctaataACCTAAATTGATTTGTGGGTaaaaaaaacgtcagaaaaagtgccaaaaatattgaaaacgACAAAACGGTACAACATTCACACCGCAGACCACAGAGAGAGCCTTTGGAATAGTTT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU203235 lncRNA downstream 69 38690188 ~ 38691776 (-) True G150193
TU203248 lncRNA downstream 12365 38679105 ~ 38679480 (-) True G150202
TU203240 lncRNA downstream 78790 38612247 ~ 38613055 (-) False G150196
TU203241 lncRNA downstream 79066 38612247 ~ 38612779 (-) True G150196
TU203207 lncRNA downstream 121159 38549972 ~ 38570686 (-) True G150169
TU203250 lncRNA upstream 4991 38699827 ~ 38700520 (-) True G150203
TU203231 lncRNA upstream 8390 38703226 ~ 39064722 (-) True G150191
TU203268 lncRNA upstream 70381 38765217 ~ 38791863 (-) True G150220
TU203282 lncRNA upstream 82777 38777613 ~ 38826725 (-) True G150232
TU203280 lncRNA upstream 152822 38847658 ~ 38874828 (-) True G150230
XM_039821286.1 mRNA downstream 20032 38645709 ~ 38671813 (-) False lratb.1
XM_039821973.1 mRNA downstream 56269 38628024 ~ 38635576 (-) False LOC120572655
XM_039821972.1 mRNA downstream 64541 38606289 ~ 38627304 (-) True LOC120572654
XM_039823118.1 mRNA downstream 126196 38561962 ~ 38565649 (-) True LOC120573401
XM_039821971.1 mRNA downstream 186220 38487094 ~ 38505625 (-) True LOC120572653
XM_039821436.1 mRNA upstream 40348 38735184 ~ 38743390 (-) True LOC120572225
XM_039821589.1 mRNA upstream 98726 38793562 ~ 38816682 (-) True cfi
XM_039821590.1 mRNA upstream 133724 38828560 ~ 38866782 (-) True LOC120572318
XM_039821975.1 mRNA upstream 187402 38882238 ~ 38889171 (-) True LOC120572656
XM_039821591.1 mRNA upstream 194059 38888895 ~ 38899886 (-) True LOC120572319
TU203233 other downstream 2252 38611655 ~ 38689593 (-) True G150192
TU203245 other downstream 23874 38644566 ~ 38667971 (-) True lratb.1
TU203220 other downstream 56252 38627757 ~ 38635593 (-) True LOC120572655
TU203219 other downstream 58793 38561269 ~ 38633052 (-) False LOC120572655
TU203204 other downstream 150675 38487968 ~ 38541170 (-) False LOC120572653

Expression Profile