RNA id: TU203240



Basic Information


Item Value
RNA id TU203240
length 221
lncRNA type intronic
GC content 0.42
exon number 2
gene id G150196
representative False

Chromosome Information


Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 38612247 ~ 38613055 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


gtaagggttaaggttaggcatttagttgtgatggttaagtttagggtaagggttaaggttaggcatttagttgtgatggttaaggttagggtaagggttaaggttaggcatttagttgtgatggttaaggttagggtaagggttaaggttaggcatttagttgtgatggttaaggttagggtaaggggctagggaatgcattatgtcaatgatgggtcccc

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU203207 lncRNA downstream 41561 38549972 ~ 38570686 (-) True G150169
TU203208 lncRNA downstream 110865 38497665 ~ 38501382 (-) True G150170
XR_005641721.1 lncRNA downstream 118619 38491947 ~ 38493628 (-) True LOC120573413
TU203021 lncRNA downstream 154653 38455011 ~ 38457594 (-) True G150057
TU203020 lncRNA downstream 156836 38455011 ~ 38455411 (-) False G150057
TU203248 lncRNA upstream 66050 38679105 ~ 38679480 (-) True G150202
TU203235 lncRNA upstream 77133 38690188 ~ 38691776 (-) True G150193
TU203237 lncRNA upstream 78790 38691845 ~ 38694836 (-) True G150194
TU203250 lncRNA upstream 86772 38699827 ~ 38700520 (-) True G150203
TU203231 lncRNA upstream 90171 38703226 ~ 39064722 (-) True G150191
XM_039823118.1 mRNA downstream 46598 38561962 ~ 38565649 (-) True LOC120573401
XM_039821971.1 mRNA downstream 106622 38487094 ~ 38505625 (-) True LOC120572653
XM_039823104.1 mRNA downstream 124878 38475763 ~ 38487369 (-) True LOC120573391
XM_039823105.1 mRNA downstream 126594 38475763 ~ 38485653 (-) False LOC120573391
XM_039823119.1 mRNA downstream 318056 38285892 ~ 38294191 (-) True LOC120573402
XM_039821973.1 mRNA upstream 14969 38628024 ~ 38635576 (-) False LOC120572655
XM_039821286.1 mRNA upstream 32654 38645709 ~ 38671813 (-) False lratb.1
XM_039821436.1 mRNA upstream 122129 38735184 ~ 38743390 (-) True LOC120572225
XM_039821589.1 mRNA upstream 180507 38793562 ~ 38816682 (-) True cfi
XM_039821590.1 mRNA upstream 215505 38828560 ~ 38866782 (-) True LOC120572318
TU203204 other downstream 71077 38487968 ~ 38541170 (-) False LOC120572653
TU203212 other downstream 78947 38528917 ~ 38533300 (-) True G150174
TU203205 other downstream 106606 38487968 ~ 38505641 (-) False LOC120572653
TU202965 other downstream 334000 38246640 ~ 38278247 (-) True G150012
XR_005641705.1 other downstream 432767 38169493 ~ 38179480 (-) False LOC120573395
TU203220 other upstream 14702 38627757 ~ 38635593 (-) True LOC120572655
TU203245 other upstream 31511 38644566 ~ 38667971 (-) True lratb.1

Expression Profile