RNA id: XM_039821286.1



Basic Information


Item Value
RNA id XM_039821286.1
length 1060
RNA type mRNA
GC content 0.63
exon number 3
gene id lratb.1
representative False

Chromosome Information


Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 38644566 ~ 38671813 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


GCTGCTGGTGTTGAATGACAGGAGAAAGATGAGCTGTGTGATGAAGGGACCCCGACTGAGCTGCAGGAAAAACAGGCGACTGAGGGGAATGACGTCACGCagccctccccctcccctcccctcccctccgtcTCCAAAGTTTCCCCTAAAGAAGGAGAACCTctccagagaggagagagggaggaccGAGGCAGGACGGAAACCAAACTTCTGCTTCTCcctcttctttttcctttcttttttcttttggtagttttcttttttctctctctttctgtatttTTGGGTCATTGCTTAATTTTTTGCAGTGATGCTGGACACGCTCACCTTCCTCCTGGAGAAACTCTTCCTCCTCGCGCACATCAAGCTGTCCAGCCTGCTGCCTCCGCTGGGCGGCAGAGCCCGCGCCGAGCAGCCGCTCGCCAGGCGCCCCGAGCGGGACGAGTGTCCTCCGGCGCAGCCCGGCGGCCCTCCTCCGCCGAAGTTCCAGCGCGGGGACCTGCTGGAAGTCCCGCGCACTCTCTTCACCCACTTCGGCATCTACCTGGGCGACAACCGGGTGGCGCACCTCATCCCGGACATCCTGCCGTCGCTGACCGCGGACAGCCGGCACATCCAGGAGACGGTGACGAACACGCGGCTGGTGCTCGGGGTGCTCTGCAAGCGCGCCACCGTCCGCGTGGACTCCGTGGAGGACTTCGCGTACGGCGCCGGGATCCTGCTCAACGCCATGGACCGCGCGGTGCTCCGGAGCGCGCTGCCCGGGGAGGAGGTGGCCCGGCGCGCGGAGAGGCTGGTCGGCGCCGTGTCCTACAGCCTGCTGTGGAACAACTGCGAGCACTTCGTCACCTACTGCCGCTACGGGGCCGCGCAGAGCCTGCAGACCGACCAGTTCTGTGAGTGGCTGAAGTCGCTGATCCGGGACCGGCGAACCGTTGTCCTGTCGGCGCTGCTGGGACTCCTGTCCATGTCGTGTTTGGGAATCTCGCCCAGCACCACCGTGCCCGCCCTTCTCGTCCCCTTCACCCTGTGGATGGTCAGCTAGAAGCTCCGAGATTCA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU203240 lncRNA downstream 32654 38612247 ~ 38613055 (-) False G150196
TU203241 lncRNA downstream 32930 38612247 ~ 38612779 (-) True G150196
TU203207 lncRNA downstream 75023 38549972 ~ 38570686 (-) True G150169
TU203208 lncRNA downstream 144327 38497665 ~ 38501382 (-) True G150170
XR_005641721.1 lncRNA downstream 152081 38491947 ~ 38493628 (-) True LOC120573413
TU203248 lncRNA upstream 7292 38679105 ~ 38679480 (-) True G150202
TU203235 lncRNA upstream 18375 38690188 ~ 38691776 (-) True G150193
TU203237 lncRNA upstream 20032 38691845 ~ 38694836 (-) True G150194
TU203250 lncRNA upstream 28014 38699827 ~ 38700520 (-) True G150203
TU203231 lncRNA upstream 31413 38703226 ~ 39064722 (-) True G150191
XM_039821973.1 mRNA downstream 10133 38628024 ~ 38635576 (-) False LOC120572655
XM_039821972.1 mRNA downstream 18405 38606289 ~ 38627304 (-) True LOC120572654
XM_039823118.1 mRNA downstream 80060 38561962 ~ 38565649 (-) True LOC120573401
XM_039821971.1 mRNA downstream 140084 38487094 ~ 38505625 (-) True LOC120572653
XM_039823104.1 mRNA downstream 158340 38475763 ~ 38487369 (-) True LOC120573391
XM_039821436.1 mRNA upstream 63371 38735184 ~ 38743390 (-) True LOC120572225
XM_039821589.1 mRNA upstream 121749 38793562 ~ 38816682 (-) True cfi
XM_039821590.1 mRNA upstream 156747 38828560 ~ 38866782 (-) True LOC120572318
XM_039821975.1 mRNA upstream 210425 38882238 ~ 38889171 (-) True LOC120572656
XM_039821591.1 mRNA upstream 217082 38888895 ~ 38899886 (-) True LOC120572319
TU203220 other downstream 10116 38627757 ~ 38635593 (-) True LOC120572655
TU203219 other downstream 12657 38561269 ~ 38633052 (-) False LOC120572655
TU203204 other downstream 104539 38487968 ~ 38541170 (-) False LOC120572653
TU203212 other downstream 112409 38528917 ~ 38533300 (-) True G150174
TU203205 other downstream 140068 38487968 ~ 38505641 (-) False LOC120572653

Expression Profile